Code

Simplified version of Hello-GATK#376

Code

Merged

adamrtalbot merged 12 commits intomasternextflow-io/training:masterfrom vdauwera-hello-gatk-simplifiednextflow-io/training:vdauwera-hello-gatk-simplifiedCopy head branch name to clipboardSep 25, 2024

+371-342

Commits

Commits on Sep 25, 2024

• Simplified version of Hello-GATK

  Show description for a84061a
  vdauwera

  authored
  a84061a

• Intermediate scripts by section

  vdauwera

  authored
  292dfd2

• starter script for hello-gatk

  vdauwera

  authored
  e8b7591

• Replace bams with Adam's

  vdauwera

  authored
  d69c265

• Add Adam's smaller reference files

  vdauwera

  authored
  e543850

• Delete hello-nextflow/data/samplesheet.csv

  Show description for e0ee863
  vdauwera

  authored
  e0ee863

• Delete hello-nextflow/data/ref.tar.gz

  Show description for 7a7ccdc
  vdauwera

  authored
  7a7ccdc

• Delete hello-nextflow/data/intervals.list

  Show description for d096435
  vdauwera

  authored
  d096435

• Move ref under data (oops)

  vdauwera

  committed
  f84afa1

• convert fromPath().collect() to file()

  Show description for 3f684fc
  vdauwera

  committed
  3f684fc

• Prettier fixes

  Show description for 264c373
  vdauwera

  committed
  264c373

• addressing review

  Show description for 1fd5c55
  vdauwera

  committed
  1fd5c55