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  1. Irys-scaffolding Irys-scaffolding Public

    Forked from kstatebioinfo/Irys-scaffolding

    scripts to parse IrysView output

    Perl 39 10

  2. read-cleaning-format-conversion read-cleaning-format-conversion Public

    Short scripts to convert or modify Bioinformatics files

    Python 7 5

  3. transcriptome-and-genome-assembly transcriptome-and-genome-assembly Public

    Scripts in this repository have been used to assemble de novo transcriptomes and genomes

    Perl 4 3

  4. RNA-Seq-annotation-and-comparison RNA-Seq-annotation-and-comparison Public

    Perl 2 3

  5. BNGCompare BNGCompare Public

    Scripts for summarizing Irys Bionano output

    Perl 2 2

  6. IrysOVERview IrysOVERview Public

    summarize and graph BioNano Genomics' Irys output

    1

Repositories

Showing 10 of 10 repositories
  • Irys-scaffolding Public Forked from kstatebioinfo/Irys-scaffolding

    scripts to parse IrysView output

    i5K-KINBRE-script-share/Irys-scaffolding’s past year of commit activity
    Perl 39 MIT 13 3 0 Updated Sep 3, 2015
  • read-cleaning-format-conversion Public

    Short scripts to convert or modify Bioinformatics files

    i5K-KINBRE-script-share/read-cleaning-format-conversion’s past year of commit activity
    Python 7 MIT 5 1 0 Updated Sep 2, 2015
  • i5K-KINBRE-script-share/2015-07-23-stanford’s past year of commit activity
    Python 0 1 0 0 Updated Jul 22, 2015
  • i5K-KINBRE-script-share/genome-annotation-and-comparison’s past year of commit activity
    Perl 0 MIT 2 0 0 Updated May 14, 2015
  • transcriptome-and-genome-assembly Public

    Scripts in this repository have been used to assemble de novo transcriptomes and genomes

    i5K-KINBRE-script-share/transcriptome-and-genome-assembly’s past year of commit activity
    Perl 4 MIT 3 0 0 Updated May 14, 2015
  • i5K-KINBRE-script-share/RNA-Seq-annotation-and-comparison’s past year of commit activity
    Perl 2 MIT 3 1 0 Updated May 14, 2015
  • BNGCompare Public

    Scripts for summarizing Irys Bionano output

    i5K-KINBRE-script-share/BNGCompare’s past year of commit activity
    Perl 2 2 0 0 Updated May 14, 2015
  • FAQ Public

    Frequently asked questions about using Github scripts or working on Beocat

    i5K-KINBRE-script-share/FAQ’s past year of commit activity
    0 CC0-1.0 1 0 0 Updated Aug 29, 2014
  • BAM_and_SAM_files_tools Public

    Scripts to summarize alignments and manipulate BAM and SAM alignments files

    i5K-KINBRE-script-share/BAM_and_SAM_files_tools’s past year of commit activity
    0 MIT 1 0 0 Updated Jun 12, 2014
  • IrysOVERview Public

    summarize and graph BioNano Genomics' Irys output

    i5K-KINBRE-script-share/IrysOVERview’s past year of commit activity
    1 0 2 0 Updated Oct 3, 2013

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