Fix the verify_ROOT function which was not detecting a compatible ROO… #3003
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| name: CentOS CI | |
| on: | |
| push: | |
| pull_request: | |
| branches: | |
| - master | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: centos:7 | |
| steps: | |
| - name: Install dependencies | |
| run: | | |
| yum -y update | |
| yum -y install centos-release-scl epel-release | |
| yum -y install man wget environment-modules libXt-devel libXext-devel ninja-build make \ | |
| devtoolset-10-gcc* numactl-devel openmpi3-devel freeglut-devel \ | |
| scl-utils which xorg-x11-server-Xvfb fontconfig mesa-dri-drivers | |
| yum -y install @development zlib-devel bzip2 bzip2-devel readline-devel sqlite \ | |
| sqlite-devel openssl-devel xz xz-devel libffi-devel findutils lapack-devel blas-devel | |
| yum -y remove git* | |
| yum -y install https://packages.endpointdev.com/rhel/7/os/x86_64/endpoint-repo-1.10-1.x86_64.rpm | |
| yum -y install git | |
| curl -L -O https://github.com/Kitware/CMake/releases/download/v3.19.3/cmake-3.19.3-Linux-x86_64.sh | |
| chmod +x cmake-3.19.3-Linux-x86_64.sh | |
| ./cmake-3.19.3-Linux-x86_64.sh --skip-license --prefix=/usr/local | |
| - name: Start Xvfb | |
| run: | | |
| set -e | |
| yum -y install xorg-x11-server-Xvfb | |
| XVFBARGS=":99 -ac -screen 0 2560x1440x24" | |
| /usr/bin/Xvfb $XVFBARGS >> /tmp/Xvfb.out 2>&1 & | |
| disown -ar | |
| sleep 3 | |
| - name: Set OSVERS | |
| run: | | |
| ID=$(grep -oP '(?<=^ID=).+' /etc/os-release | tr -d '"') | |
| VERSION=$(grep -oP '(?<=^VERSION_ID=).+' /etc/os-release | tr -d '"') | |
| echo "OSVERS=$ID-$VERSION" >> $GITHUB_ENV | |
| - name: Cache pyenv | |
| uses: actions/cache@v2 | |
| id: pyenv-cache | |
| with: | |
| path: ~/.pyenv | |
| key: ${{ env.OSVERS }}-pyenv-3.9.1 | |
| - name: Install pyenv dependency | |
| if: steps.pyenv-cache.outputs.cache-hit != 'true' | |
| run: | | |
| if [ ! -f "$HOME/.pyenv/bin/pyenv" ]; then | |
| curl https://pyenv.run | bash | |
| fi | |
| export PATH="$HOME/.pyenv/bin:$PATH" | |
| eval "$(pyenv init --path)" | |
| eval "$(pyenv init -)" | |
| PYTHON_CONFIGURE_OPTS="--enable-shared" pyenv install 3.9.1 | |
| pyenv shell 3.9.1 | |
| - name: Checkout BioDynaMo | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Cache Third Party Packages | |
| uses: actions/cache@v2 | |
| with: | |
| path: build/third_party | |
| key: ${{ env.OSVERS }}-third-party-${{ hashFiles('cmake/external/SHA256Digests.cmake') }} | |
| - name: Build BioDynaMo | |
| shell: bash | |
| run: | | |
| export PATH="$HOME/.pyenv/bin:$PATH" | |
| eval "$(pyenv init --path)" | |
| eval "$(pyenv init -)" | |
| pyenv shell 3.9.1 | |
| . scl_source enable devtoolset-10 || true | |
| . /etc/profile.d/modules.sh || true | |
| module load mpi | |
| cmake -G Ninja \ | |
| -Dparaview=ON \ | |
| -Dbenchmark=ON \ | |
| -Dlibgit2=ON \ | |
| -Dnuma=OFF \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -B build | |
| cmake --build build --parallel --config Release | |
| - name: Unit tests BioDynaMo | |
| shell: bash | |
| working-directory: build | |
| run: | | |
| . bin/thisbdm.sh | |
| bdm config | |
| export DISPLAY=:99.0 | |
| sleep 3 | |
| ninja run-unit-tests |