MS Annika is a crosslink search engine based on MS Amanda, aimed at identifying crosslinks of cleavable and non-cleavable crosslinkers from MS2 and MS3 spectra.
Export MS Annika crosslink results to different formats.
Extensions for better usability of the cross-linking tool MaXLinker.
Calculates Intensities of Cross-linked Peptides from MS Annika CSMs.
List of all available extensions for our cross-linking search engine MS Annika.
A script to merge and optionally validate several MS Annika search results.
Short talk presentation, poster and abstract for APMRS-CEEPC 2024
Generate a spectral library for Spectronaut from MS Annika results.
Results and Evaluation of the MS3 Search Algorithm of MS Annika.
Helper scripts for crosslink analysis.
A script and functions to group and validate MS Annika results.
Repository containing scripts used for the analysis and visualization of the results of the MS Annika 3.0 non-cleavable crosslink search.
Short Talk Presentation for APMRS 2022
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