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nf-core / scrnaseq

A single-cell RNAseq pipeline for 10X genomics data

workflow rna-seq pipeline nextflow single-cell kallisto 10x-genomics 10xgenomics nf-core bustools alevin cellranger star-solo

Updated Dec 16, 2024
Nextflow

nf-core / marsseq

MARS-seq v2 pre-processing pipeline with velocity

workflow pipeline nextflow single-cell single-cell-rna-seq nf-core star-solo mars-seq transcriptional-dynamics facs-sorting

Updated Dec 12, 2024
Nextflow

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