A bioinformatics pipeline to analyze mtDNA from NGS data
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Updated
Mar 5, 2024 - Python
A bioinformatics pipeline to analyze mtDNA from NGS data
Tools for analyzing raw DNA test data files. Shows Y chromosome and mitochondrial mtDNA haplogroups. LGPLv3 - use freely but share improvements.
Mitochondrial DNA sequence assembly and annotation for nematodes using NGS data.
Y-DNA and mtDNA Haplotyping for WeGene, It features DFS algorithm and specific rules to search the most appropriate terminal haplotype based on haplogroup tree which should contain SNP information with position and derived mutation.
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