Brainchop: In-browser 3D MRI rendering and segmentation

[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

Use of state of the art Convolutional neural network architectures including 3D UNet, 3D VNet and 2D UNets for Brain Tumor Segmentation and using segmented image features for Survival Prediction of patients through deep neural networks.

This repo contain my assignment notebooks for the Coursera AI for Medicine Specialization course. The link to the course: https://www.coursera.org/specializations/ai-for-medicine

PyTorch 3D U-Net implementation for Multimodal Brain Tumor Segmentation (BraTS 2021)

A pytorch implementation of 3D UNet for 3D MRI Segmentation.

AssemblyNet: 3D Whole Brain MRI segmentation pipeline

Multimodal Brain Tumor Segmentation using BraTS 2018 Dataset.

Brain Segmentation on MRBrains18

Computational Anatomy Toolbox for SPM12 or SPM25

Federated learning with homomorphic encryption enables multiple parties to securely co-train artificial intelligence models in pathology and radiology, reaching state-of-the-art performance with privacy guarantees.

Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI

Neural network-based preprocessing of MRI data: Prepping brain images in seconds 🔥

[AAAI'20] Segmenting Medical MRI via Recurrent Decoding Cell (Spotlight)

PNH segmentation pipelines based on nipype

I have completed this specialization from Coursera by deeplearning.ai. I have uploaded the solutions of the assignments in this repo.

The MAMA-MIA Dataset: A Multi-Center Breast Cancer DCE-MRI Public Dataset with Expert Segmentations

SASHIMI segmentation is a Matlab App for semi-automatic interactive segmentation of multi-slice images.

Automatic segment and generate masks for any 3D medical images using SAM model without prompt

Automated subdivision of white matter hyperintensities