Find and visualize rearrangements in DNA sequences
♥ Efficient Estimation of Evolutionary Distances
Fast and accurate tool for estimating genomic distances between genome-skims
A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
♥ Fast and Accurate Estimation of Evolutionary Distances
A tool to infer metagenomic sample composition
Mapping-free software for fishing relevant reads in an RNA-Seq sample
Deep learning based alignment-free method for protein family modeling and prediction
MeShClust2: Application of alignment-free identity scores in clustering long DNA sequences
Alignment-free simulation, computation, and visualization of Low-compexity regions in biological data
Alignment-Free RGBT Salient Object Detection: Semantics-guided Asymmetric Correlation Network and A Unified Benchmark
AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data
genotyping by Mapping-free ALternate-allele detection of known VAriants
Alignment-free method to identify and analyse discriminant genomic subsequences within pathogen sequences
A tool for compression and analysis of DNA sequences
Extract SNPs and accessory differences in closely related bacterial genomes from k-mers
A neural network for alignment-free, kingdom-level classification of eDNA
A memory efficient tool to map and visualize evolutionary regions
Generalized k-mer return time distribution (RTD) calculation library
An ensemble method for predicting transcription factor in protein sequences
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