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Enhancement/core ehrdata class #33

Merged

eroell merged 3 commits into main from enhancement/core-ehrdata-class

Oct 8, 2024

Contributor

eroell commented Oct 8, 2024

Add core ehrdata class, featuring

all fields from anndata
a field .r, that aligns along obs with first axis, var with second axis, and has a 3rd dimension (time)
a field .t, a pandas dataframe for the time
sliceing 1D, 2D, 3D

eroell added 3 commits

October 8, 2024 16:15


          add EHRData class

8208c5d


          ehrdata w/ 3D .r field and sliceing

765bce0


          remove comments

33cd779

Contributor Author

eroell commented Oct 8, 2024

Relevant enough to be on main, fixes and more things to come
#24

eroell merged commit 6c2230a into main

5 of 6 checks passed

eroell mentioned this pull request

Implement a first prototype #36

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