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  1. vembrane/vembrane vembrane/vembrane Public

    vembrane filters VCF records using python expressions

    Python 57 5

  2. snakemake-workflows/cyrcular-calling snakemake-workflows/cyrcular-calling Public

    A Snakemake workflow for ecDNA detection in Nanopore or Illumina sequencing reads derived from DNA samples enriched for circular DNA.

    Python 3 2

  3. snakemake/snakemake snakemake/snakemake Public

    This is the development home of the workflow management system Snakemake. For general information, see

    HTML 2.3k 561

  4. rust-bio/rust-bio rust-bio/rust-bio Public

    This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

    Rust 1.6k 207

  5. varfish-org/mehari varfish-org/mehari Public

    VEP-like tool for sequence ontology and HGVS annotation of VCF files

    Rust 16 1