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    • bycon

      Public
      Bycon - A Python Based Beacon API (beacon-project.io) implementation leveraging the Progenetix (progenetix.org) data model
      Python
      Creative Commons Zero v1.0 Universal
      8504Updated Dec 13, 2024Dec 13, 2024
    • Web frontend for the bycon implementation of the Beacon v2 API
      JavaScript
      Creative Commons Zero v1.0 Universal
      3000Updated Dec 9, 2024Dec 9, 2024
    • Web frontend for the Progenetix cancer genome resource
      JavaScript
      Creative Commons Zero v1.0 Universal
      3300Updated Dec 9, 2024Dec 9, 2024
    • Web frontend for the Cancercelllines genome resource - a Progenetix project
      JavaScript
      3000Updated Dec 2, 2024Dec 2, 2024
    • pgxRpi

      Public
      R
      0300Updated Oct 31, 2024Oct 31, 2024
    • byconaut

      Public
      Scripts for genomic data manipulation based on the bycon package
      Python
      Other
      1000Updated Oct 29, 2024Oct 29, 2024
    • Website code for the refCNV resource
      JavaScript
      Creative Commons Zero v1.0 Universal
      0000Updated Oct 10, 2024Oct 10, 2024
    • A simple plot cgi for visualizing connections, e.g. between collaborators (Circos inspired)
      Perl
      0000Updated Feb 28, 2024Feb 28, 2024
    • pgxMaps

      Public
      Some Perlish data to map projections
      Perl
      The Unlicense
      0000Updated Dec 21, 2023Dec 21, 2023
    • byconeer

      Public
      Applications and utilities for (Progenetix) data import, access & processing - extensions to `bycon`
      Python
      0000Updated Aug 30, 2023Aug 30, 2023
    • PGX

      Public
      Genome profile visualisation for arrayMap and Progenetix
      Perl
      0000Updated May 17, 2023May 17, 2023
    • schemas-legacy

      Public archive
      data schemas for the Progenetix databases
      0000Updated Aug 29, 2022Aug 29, 2022
    • BeaconPlus-legacy

      Public archive
      beaconplus v1.n server libraries (to be replaced by bycon)
      Perl
      0000Updated Aug 29, 2022Aug 29, 2022
    • oncopubs

      Public
      Submission repository for articles to be included in the Progenetix publication collection of cancer genome profiling studies
      0010Updated May 20, 2022May 20, 2022
    • info.progenetix.org website
      JavaScript
      Creative Commons Zero v1.0 Universal
      2000Updated May 6, 2022May 6, 2022
    • HTML
      1010Updated Dec 27, 2021Dec 27, 2021
    • Python
      0000Updated Oct 20, 2021Oct 20, 2021
    • Templates & guides for Jekyll based websites
      HTML
      1000Updated Oct 7, 2021Oct 7, 2021
    • ICDOntologies repository provides mappings for combinations of ICD-O 3 Morphology and Topography codes to NCIt neoplasm core classes.
      Python
      0030Updated Nov 26, 2020Nov 26, 2020
    • The icdot2uberon project provides mappings between ICD-O disease loci and UBERON anatomical structures
      Python
      0200Updated Sep 30, 2020Sep 30, 2020
    • beaconplus-ui

      Public archive
      Beacon+ - Interface for the Beacon+ Server (replaced in progenetix-next for bycon / Beacon+ v2.n)
      JavaScript
      0010Updated Jun 29, 2020Jun 29, 2020
    • beaconplus-server

      Public archive
      server cgi for Beacon+ development
      Perl
      0000Updated May 25, 2020May 25, 2020
    • PGXDB

      Public archive
      Perl module for arrayMap and Progenetix resource updates
      Perl
      0000Updated Jul 31, 2019Jul 31, 2019
    • arraymap2ga4gh

      Public archive
      Schema examples
      2220Updated Oct 16, 2017Oct 16, 2017