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Add new citation #1485

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Apr 25, 2024
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Add new citation #1485

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335c8ac
add new citation
FriederikeHanssen Apr 25, 2024
dd0809e
Update CHANGELOG.md
FriederikeHanssen Apr 25, 2024
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -13,6 +13,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

- [#1477](https://github.com/nf-core/sarek/pull/1477) - Back to dev
- [#1482](https://github.com/nf-core/sarek/pull/1482) - Pin `nf-prov` plugin to `1.2.2`
- [#1485](https://github.com/nf-core/sarek/pull/1485) - Update citation for publication

### Fixed

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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -193,7 +193,7 @@ For further information or help, don't hesitate to get in touch on the [Slack `#

If you use `nf-core/sarek` for your analysis, please cite the `Sarek` article as follows:

> Friederike Hanssen, Maxime U Garcia, Lasse Folkersen, Anders Sune Pedersen, Francesco Lescai, Susanne Jodoin, Edmund Miller, Oskar Wacker, Nicholas Smith, nf-core community, Gisela Gabernet, Sven Nahnsen **Scalable and efficient DNA sequencing analysis on different compute infrastructures aiding variant discovery** _bioRxiv_ [doi: 10.1101/2023.07.19.549462](https://doi.org/10.1101/2023.07.19.549462).
> Friederike Hanssen, Maxime U Garcia, Lasse Folkersen, Anders Sune Pedersen, Francesco Lescai, Susanne Jodoin, Edmund Miller, Oskar Wacker, Nicholas Smith, nf-core community, Gisela Gabernet, Sven Nahnsen **Scalable and efficient DNA sequencing analysis on different compute infrastructures aiding variant discovery** _ NAR Genomics and Bioinformatics_ Volume 6, Issue 2, June 2024, lqae031, [doi: 10.1093/nargab/lqae031](https://doi.org/10.1093/nargab/lqae031).

> Garcia M, Juhos S, Larsson M et al. **Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants [version 2; peer review: 2 approved]** _F1000Research_ 2020, 9:63 [doi: 10.12688/f1000research.16665.2](http://dx.doi.org/10.12688/f1000research.16665.2).

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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -391,7 +391,7 @@ manifest {
mainScript = 'main.nf'
nextflowVersion = '!>=23.04.0'
version = '3.5.0dev'
doi = '10.12688/f1000research.16665.2, 10.1101/2023.07.19.549462, 10.5281/zenodo.3476425'
doi = '10.12688/f1000research.16665.2, 10.1093/nargab/lqae031, 10.5281/zenodo.3476425'
}

// Load modules.config for DSL2 module specific options
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