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Merge pull request #1557 from maxulysse/vep_version
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update vep cache version
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maxulysse authored Jun 11, 2024
2 parents 54b3b08 + cbb09a0 commit 3f1d34d
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -23,6 +23,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- [#1552](https://github.com/nf-core/sarek/pull/1552) - Update samtools to v1.20
- [#1545](https://github.com/nf-core/sarek/pull/1545) - Update modules
- [#1553](https://github.com/nf-core/sarek/pull/1553) - Update bcftools to v1.20
- [#1557](https://github.com/nf-core/sarek/pull/1557) - Update ENSEMBLVEP cache to 111

### Fixed

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4 changes: 2 additions & 2 deletions conf/igenomes.config
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Expand Up @@ -75,7 +75,7 @@ params {
sentieon_dnascope_model = "${params.igenomes_base}/Homo_sapiens/GATK/GRCh38/Annotation/Sentieon/SentieonDNAscopeModel1.1.model"
snpeff_db = '105'
snpeff_genome = 'GRCh38'
vep_cache_version = '110'
vep_cache_version = '111'
vep_genome = 'GRCh38'
vep_species = 'homo_sapiens'
}
Expand Down Expand Up @@ -336,7 +336,7 @@ params {
ngscheckmate_bed = "${params.igenomes_base}/genomics/homo_sapiens/genome/chr21/germlineresources/SNP_GRCh38_hg38_wChr.bed"
snpeff_db = '105'
snpeff_genome = 'WBcel235'
vep_cache_version = '110'
vep_cache_version = '111'
vep_genome = 'WBcel235'
vep_species = 'caenorhabditis_elegans'
}
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