remove params from subworkflows #5450
maxulysseci.yml
on: pull_request
Check for changes (nf-test)
8s
Check for changes (pytest)
4s
Matrix: nftest
Matrix: pytest
confirm-pass
0s
Annotations
5 errors and 4 warnings
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sentieon_dnascope_joint_germline docker NF 23.04.0
Process returned exit code 1
Launched as "TMPDIR=~ PROFILE=docker pytest --tag sentieon_dnascope_joint_germline --symlink --kwdof --git-aware --color=yes"
Launched at "/home/runner/work/sarek/sarek"
Attempts exhausted, made 3 attempts :
Attempt #1 started at : 17:03:24 GMT+0000 (Coordinated Universal Time)
Attempt #2 started at : 17:04:53 GMT+0000 (Coordinated Universal Time)
Attempt #3 started at : 17:06:08 GMT+0000 (Coordinated Universal Time)
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sentieon_dnascope_joint_germline docker NF latest-everything
Process returned exit code 1
Launched as "TMPDIR=~ PROFILE=docker pytest --tag sentieon_dnascope_joint_germline --symlink --kwdof --git-aware --color=yes"
Launched at "/home/runner/work/sarek/sarek"
Attempts exhausted, made 3 attempts :
Attempt #1 started at : 17:03:41 GMT+0000 (Coordinated Universal Time)
Attempt #2 started at : 17:05:06 GMT+0000 (Coordinated Universal Time)
Attempt #3 started at : 17:06:17 GMT+0000 (Coordinated Universal Time)
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sentieon_haplotyper_joint_germline docker NF latest-everything
Process returned exit code 1
Launched as "TMPDIR=~ PROFILE=docker pytest --tag sentieon_haplotyper_joint_germline --symlink --kwdof --git-aware --color=yes"
Launched at "/home/runner/work/sarek/sarek"
Attempts exhausted, made 3 attempts :
Attempt #1 started at : 17:03:31 GMT+0000 (Coordinated Universal Time)
Attempt #2 started at : 17:05:25 GMT+0000 (Coordinated Universal Time)
Attempt #3 started at : 17:07:04 GMT+0000 (Coordinated Universal Time)
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sentieon_haplotyper_joint_germline docker NF 23.04.0
Process returned exit code 1
Launched as "TMPDIR=~ PROFILE=docker pytest --tag sentieon_haplotyper_joint_germline --symlink --kwdof --git-aware --color=yes"
Launched at "/home/runner/work/sarek/sarek"
Attempts exhausted, made 3 attempts :
Attempt #1 started at : 17:03:41 GMT+0000 (Coordinated Universal Time)
Attempt #2 started at : 17:05:42 GMT+0000 (Coordinated Universal Time)
Attempt #3 started at : 17:07:28 GMT+0000 (Coordinated Universal Time)
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confirm-pass
Process completed with exit code 1.
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sentieon_dnascope_joint_germline docker NF 23.04.0
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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sentieon_dnascope_joint_germline docker NF latest-everything
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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sentieon_haplotyper_joint_germline docker NF latest-everything
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
|
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sentieon_haplotyper_joint_germline docker NF 23.04.0
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
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logs-docker
Expired
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1.96 GB |
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