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Add wave + fusion test with Google Batch
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Signed-off-by: Paolo Di Tommaso <[email protected]>
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pditommaso committed Feb 21, 2023
1 parent d5fbab4 commit b541c06
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Showing 3 changed files with 16 additions and 1 deletion.
7 changes: 6 additions & 1 deletion validation/wave-tests/example6/run-aws.sh
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@@ -1,2 +1,7 @@
$NXF_CMD run rnaseq-nf -profile batch -with-wave
$NXF_CMD run \
rnaseq-nf \
-profile batch \
-with-wave \
-with-fusion \
-process.scratch false

7 changes: 7 additions & 0 deletions validation/wave-tests/example6/run-gcp.sh
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@@ -0,0 +1,7 @@
$NXF_CMD run \
rnaseq-nf \
-profile gcb \
-with-wave \
-with-fusion \
-process.scratch false

3 changes: 3 additions & 0 deletions validation/wave.sh
Original file line number Diff line number Diff line change
Expand Up @@ -17,3 +17,6 @@ echo "Test Wave running rnaseq-nf with Fusion on local executor"

echo "Test Wave running rnaseq-nf with Fusion on AWS Batch"
(cd wave-tests/example6; bash run-aws.sh)

echo "Test Wave running rnaseq-nf with Fusion on Google Batch"
(cd wave-tests/example6; bash run-aws.sh)

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