Update readme

mourisl · Nov 7, 2024 · dc25bd3 · dc25bd3
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diff --git a/README.md b/README.md
@@ -74,6 +74,8 @@ An example of pre-built index containing human, bacteria, archea, and virus geno
         -x FILE: index prefix
         -c FILE: classification file
 
+The quantification results will be affected by the "-k" option from the classification program "centrifuger". Increasing "-k" will provide ambiguous but more specific classification result, potentially can improve the quantification result.  
+
 ### Input/Output
 
 The primary input to Centrifuger is the index of the genome database (-x), and gzipped or uncompressed read fastq files (-1/-2 for paired; -u for single-end).

diff --git a/defs.h b/defs.h
@@ -5,7 +5,7 @@
 
 //#define DEBUG
 
-#define CENTRIFUGER_VERSION "1.0.6-r174"
+#define CENTRIFUGER_VERSION "1.0.6-r175"
 
 extern char nucToNum[26] ; 
 extern char numToNuc[26] ;