GitHub - deweylab/cell-type-classification-paper: Code implementing experiments described in "Hierarchical cell type classification using mass, heterogeneous RNA-seq data from human primary cells"

deweylab / cell-type-classification-paper Public

Code implementing experiments described in "Hierarchical cell type classification using mass, heterogeneous RNA-seq data from human primary cells"

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Name		Name	Last commit message	Last commit date
Latest commit History 50 Commits
build_dataset		build_dataset
common		common
graph_lib @ 9b98b46		graph_lib @ 9b98b46
metadata		metadata
onto_lib @ fdfc92d		onto_lib @ fdfc92d
train_test_experiments		train_test_experiments
train_test_other_methods		train_test_other_methods
training_parameter_sets		training_parameter_sets
.gitmodules		.gitmodules
README.md		README.md
Snakefile		Snakefile
apply_model.py		apply_model.py
cello.png		cello.png
determine_threshold_per_label.py		determine_threshold_per_label.py
download_resources.sh		download_resources.sh
requirements.txt		requirements.txt
select_final_cell_types.py		select_final_cell_types.py
train_model.py		train_model.py