bioconductor-scpipe: add zlib and liblzma-devel to host

bioconda · Dec 26, 2024 · 739e1b7 · 739e1b7
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commit 739e1b7
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diff --git a/recipes/bioconductor-scpipe/build_failure.linux-64.yaml b/recipes/bioconductor-scpipe/build_failure.linux-64.yaml
diff --git a/recipes/bioconductor-scpipe/meta.yaml b/recipes/bioconductor-scpipe/meta.yaml
@@ -29,194 +29,105 @@ package:
 # Suggests: BiocStyle, DT, GenomicFeatures, grid, igraph, kableExtra, knitr, locStra, plotly, rmarkdown, RColorBrewer, readr, reshape2, RANN, shiny, scater (>= 1.11.0), testthat, xml2, umap
 # SystemRequirements: C++11, GNU make
 requirements:
-
   build:
     - {{ compiler('c') }}
     - {{ compiler('cxx') }}
     - make
 
   host:
-
     - bioconductor-annotationdbi >=1.68.0,<1.69.0
-
     - bioconductor-basilisk >=1.18.0,<1.19.0
-
     - bioconductor-biocgenerics >=0.52.0,<0.53.0
-
     - bioconductor-biomart >=2.62.0,<2.63.0
-
     - bioconductor-biostrings >=2.74.0,<2.75.0
-
     - bioconductor-dropletutils >=1.26.0,<1.27.0
-
     - bioconductor-genomicalignments >=1.42.0,<1.43.0
-
     - bioconductor-genomicranges >=1.58.0,<1.59.0
-
     - bioconductor-iranges >=2.40.0,<2.41.0
-
     - bioconductor-multiassayexperiment >=1.32.0,<1.33.0
-
     - bioconductor-org.hs.eg.db >=3.20.0,<3.21.0
-
     - bioconductor-org.mm.eg.db >=3.20.0,<3.21.0
-
     - bioconductor-rhtslib >=3.2.0,<3.3.0
-
     - bioconductor-rsamtools >=2.22.0,<2.23.0
-
     - bioconductor-rsubread >=2.20.0,<2.21.0
-
     - bioconductor-rtracklayer >=1.66.0,<1.67.0
-
     - bioconductor-s4vectors >=0.44.0,<0.45.0
-
     - bioconductor-singlecellexperiment >=1.28.0,<1.29.0
-
     - bioconductor-summarizedexperiment >=1.36.0,<1.37.0
-
     - bioconductor-zlibbioc >=1.52.0,<1.53.0
-
     - r-base
-
     - r-data.table
-
     - r-dplyr
-
     - r-flexmix
-
     - r-ggally
-
     - r-ggplot2
-
     - r-glue >=1.3.0
-
     - r-hash
-
     - r-magrittr
-
     - r-mass
-
     - r-matrix >=1.5.0
-
     - r-mclust
-
     - r-purrr
-
     - r-rcpp >=0.11.3
-
     - r-reshape
-
     - r-reticulate
-
     - r-rlang
-
     - r-robustbase
-
     - r-scales
-
     - r-stringr
-
     - r-testthat
-
     - r-tibble
-
     - r-tidyr
-
     - r-vctrs >=0.5.2
-
     - libblas
-
     - liblapack
+    - zlib
+    - liblzma-devel
 
   run:
-
     - bioconductor-annotationdbi >=1.68.0,<1.69.0
-
     - bioconductor-basilisk >=1.18.0,<1.19.0
-
     - bioconductor-biocgenerics >=0.52.0,<0.53.0
-
     - bioconductor-biomart >=2.62.0,<2.63.0
-
     - bioconductor-biostrings >=2.74.0,<2.75.0
-
     - bioconductor-dropletutils >=1.26.0,<1.27.0
-
     - bioconductor-genomicalignments >=1.42.0,<1.43.0
-
     - bioconductor-genomicranges >=1.58.0,<1.59.0
-
     - bioconductor-iranges >=2.40.0,<2.41.0
-
     - bioconductor-multiassayexperiment >=1.32.0,<1.33.0
-
     - bioconductor-org.hs.eg.db >=3.20.0,<3.21.0
-
     - bioconductor-org.mm.eg.db >=3.20.0,<3.21.0
-
     - bioconductor-rhtslib >=3.2.0,<3.3.0
-
     - bioconductor-rsamtools >=2.22.0,<2.23.0
-
     - bioconductor-rsubread >=2.20.0,<2.21.0
-
     - bioconductor-rtracklayer >=1.66.0,<1.67.0
-
     - bioconductor-s4vectors >=0.44.0,<0.45.0
-
     - bioconductor-singlecellexperiment >=1.28.0,<1.29.0
-
     - bioconductor-summarizedexperiment >=1.36.0,<1.37.0
-
     - bioconductor-zlibbioc >=1.52.0,<1.53.0
-
     - r-base
-
     - r-data.table
-
     - r-dplyr
-
     - r-flexmix
-
     - r-ggally
-
     - r-ggplot2
-
     - r-glue >=1.3.0
-
     - r-hash
-
     - r-magrittr
-
     - r-mass
-
     - r-matrix >=1.5.0
-
     - r-mclust
-
     - r-purrr
-
     - r-rcpp >=0.11.3
-
     - r-reshape
-
     - r-reticulate
-
     - r-rlang
-
     - r-robustbase
-
     - r-scales
-
     - r-stringr
-
     - r-testthat
-
     - r-tibble
-
     - r-tidyr
-
     - r-vctrs >=0.5.2
 
 source:
@@ -231,3 +142,4 @@ test:
   commands:
     - $R -e "library('{{ name }}')"
 
+