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  1. AstroPathJHU/AstroPathPipeline AstroPathJHU/AstroPathPipeline Public

    The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell resolution.

    Python 18 3

  2. AstroPathJHU/mIFTO AstroPathJHU/mIFTO Public

    Multiplex Immunoflouresence Titration Optimization (mIFTO) R Package

    R 6 3

  3. AstroPathJHU/MaSS AstroPathJHU/MaSS Public

    MaSS (Merge a Single Sample); code to merge multipass inForm data

    MATLAB 2

  4. AstroPathJHU/SegTool AstroPathJHU/SegTool Public

    Create a segmentation tool for comparing inform and ML approaches while creating an unbiased ground truth

    MATLAB 1

  5. AstroPathJHU/WSIMIR AstroPathJHU/WSIMIR Public

    Perform multi-modality whole slide to whole slide pathology image registration

    MATLAB 4 1

  6. AstroPathJHU/ConvertIm3 AstroPathJHU/ConvertIm3 Public

    The executable was written by Richard Wilton to extract the bitmap and metadata information from the akoya im3 image files.ConvertIm3Path is a powershell code, added by Benjamin Green and is a soft…

    PowerShell