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NeuroDOT v1.3
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@emmaspeh emmaspeh released this 01 Mar 19:57
· 50 commits to main since this release
v1.3
78db20e

Changes since NeuroDOT v1.2:

1. Updates to Visualization functions:

  • PlotCapData: updated source/detector spacing
  • PlotMeshSurface: fixed facecolor parameter for case without data
  • PlotSlices, PlotSlice, PlotSlicesTimeTrace: adjusted colorbar settings, added white background ‘bgW’ parameter
  • Plot_RawData_Metrics_I_DQC: added params.LFO_GI to select which measurments to show in LFO plot
  • Applycmap: compatibility with params.BG when all elements are equal to zero
  • Adjust_brain_pos, PlotLRMeshes, PlotMeshSurface: added flat map ‘Fnodes’ case
  • Plot_RawData_Cap_DQC, PlotCapPhysiologyPower: fixed SNR DQ metrics to compute based on the correct method
  • DrawColoredSynchPoints: added colors to plot for up to 7 different pulses

2. Format Compatibility updates:

  • Snirf2ndot & Nirs2ndot: enforce column organization of optode position arrays
  • LoadVolumetricData, SaveVolumetricData, Nifti_4dfp: compatibility with volumetric data in sagittal and coronal orientations, compatibility with 4D data
  • Updated all functions using info.pairs and info.MEAS to be compatible with tables

3. Other function updates:

  • GLM_181206: Added R squared output
  • Added ParcelBased_fc function
  • Added Matrix_Org3 and freezeColors functions to Visualizations

4. Tutorial & Documentation updates:

  • Light Modeling: updated all light modeling scripts to use makeAnirfaster, added tutorial for Light Modeling with a subset of measurements, and added tutorial for Light Modeling with a split-pad layout
  • Loading Raw Data script and PowerPoint added for loading .snirf, .nirs, and .mat data
  • Added Script_for_Viewing_Parcels for parcel-based functional-connectivity analysis
  • Added NeuroDOT Tutorials ReadMe file
  • Updated NeuroDOT Quick Start Guide
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