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@WU-BIMAC

Worcester Image Data Management

The UMass Chan Medical School Research Data Management 4 Microscopy Image Data Group

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  1. MicroMetaApp-React MicroMetaApp-React Public

    This is the React implementation of Micro-Meta App, Microscopy Metadata for the real world!

    JavaScript 7 2

  2. MicroMetaApp-Electron MicroMetaApp-Electron Public

    Electron wrapped, stand-alone version of Micro-Meta App, microscopy metadata for the real world!

    JavaScript 7 1

  3. NBOMicroscopyMetadataSpecs NBOMicroscopyMetadataSpecs Public

    The 4DN + BINA Tiered System of Microscopy Metadata Guidelines was developed by the 4DN Imaging Standards Working Group in collaboration with the BINA Data Management and Quality Control Working Gr…

    15 4

  4. MicroMetaApp.github.io MicroMetaApp.github.io Public

    Microscopy Metadata for the real world!

    4

  5. MicroMetaApp-docs MicroMetaApp-docs Public

    Micro-Meta App documentation.

    Python 1

  6. NBO-Q_MicroscopyGlossary NBO-Q_MicroscopyGlossary Public

    4DN-BINA-OME-QUAREP Microscopy Glossary

    Python

Repositories

Showing 10 of 17 repositories
  • W-IDM_OmeroImporterPy Public

    This repository contains software that was developed to add metadata annotations to bioimage data before importing it into OMERO

    WU-BIMAC/W-IDM_OmeroImporterPy’s past year of commit activity
    Python 3 GPL-3.0 0 3 1 Updated Dec 3, 2024
  • MicroMetaApp-React Public

    This is the React implementation of Micro-Meta App, Microscopy Metadata for the real world!

    WU-BIMAC/MicroMetaApp-React’s past year of commit activity
    JavaScript 7 GPL-3.0 2 49 (5 issues need help) 4 Updated Dec 3, 2024
  • W-IDM_OmeroImporterExcelHelperPy Public

    This repository contains Python software that was created to explore file system directories and automatically collect the names of image data files to be annotated with experimental and sample preparation metadata and imported into OMERO.

    WU-BIMAC/W-IDM_OmeroImporterExcelHelperPy’s past year of commit activity
    Python 1 GPL-3.0 1 0 0 Updated Nov 29, 2024
  • MicroMetaApp-Electron Public

    Electron wrapped, stand-alone version of Micro-Meta App, microscopy metadata for the real world!

    WU-BIMAC/MicroMetaApp-Electron’s past year of commit activity
    JavaScript 7 GPL-3.0 1 11 5 Updated Nov 15, 2024
  • MicroMetaApp-Omero Public

    This is a limited-functionality, beta - implementation of the integration of Micro-Meta App in the OMERO.web client

    WU-BIMAC/MicroMetaApp-Omero’s past year of commit activity
    JavaScript 4 GPL-3.0 2 9 (1 issue needs help) 5 Updated Aug 21, 2024
  • MicroMetaExplorer Public

    Micro-Meta Explorer is used to compare and explore different Micro-Meta App generated microscope hardware JSON files

    WU-BIMAC/MicroMetaExplorer’s past year of commit activity
    JavaScript 0 GPL-3.0 0 8 0 Updated Jul 19, 2024
  • OmeroImporterPy-docs Public

    This is the documentation for the OMERO Importer Python tool.

    WU-BIMAC/OmeroImporterPy-docs’s past year of commit activity
    Python 1 0 0 0 Updated May 10, 2024
  • W-IDM_OmeroImporter Public

    This repository contains software that was developed for the management of bioimage data generated at UMass Chan Medical School and as part of the Canada Bioimaging RDM initiative.

    WU-BIMAC/W-IDM_OmeroImporter’s past year of commit activity
    Java 4 GPL-3.0 1 4 (2 issues need help) 1 Updated May 3, 2024
  • NBO-Q_MicroscopyGlossary Public

    4DN-BINA-OME-QUAREP Microscopy Glossary

    WU-BIMAC/NBO-Q_MicroscopyGlossary’s past year of commit activity
    Python 0 0 0 0 Updated Apr 1, 2024
  • NBOMicroscopyMetadataSpecs Public

    The 4DN + BINA Tiered System of Microscopy Metadata Guidelines was developed by the 4DN Imaging Standards Working Group in collaboration with the BINA Data Management and Quality Control Working Group (https://www.bioimagingna.org/qc-dm-wg) for documenting microscopy experiments and assessing the quality of image data.

    WU-BIMAC/NBOMicroscopyMetadataSpecs’s past year of commit activity
    15 LGPL-3.0 4 94 (9 issues need help) 1 Updated Jun 20, 2023

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