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auto: deploy new website
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nipreps-bot committed Oct 24, 2023
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16 changes: 8 additions & 8 deletions data-collection/intro/index.html
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Expand Up @@ -1171,14 +1171,14 @@ <h2 id="scanning-protocols">Scanning protocols<a class="headerlink" href="#scann
<td>5:41</td>
</tr>
<tr>
<td><abbr title="diffusion weighted imaging">DWI</abbr> (<abbr title="diffusion MRI">dMRI</abbr>, structural connectivity)</td>
<td>33:52</td>
<td><abbr title="diffusion weighted imaging">DWI</abbr> (<span class="arithmatex">\(B_\text{0}\)</span> field mapping)</td>
<td>00:54</td>
<td><abbr title="echo-planar imaging">EPI</abbr> <abbr title="blood-oxygen-level dependent">BOLD</abbr> (<span class="arithmatex">\(B_\text{0}\)</span> field mapping)</td>
<td>00:30</td>
</tr>
<tr>
<td><abbr title="diffusion weighted imaging">DWI</abbr> (<span class="arithmatex">\(B_\text{0}\)</span> field mapping)</td>
<td>00:54</td>
<td><abbr title="diffusion weighted imaging">DWI</abbr> (<abbr title="diffusion MRI">dMRI</abbr>, structural connectivity)</td>
<td>33:52</td>
<td><abbr title="blood-oxygen-level dependent">BOLD</abbr> (single-echo <abbr title="resting-state fMRI">RSfMRI</abbr>, eyes open)</td>
<td>20:09</td>
</tr>
Expand All @@ -1189,14 +1189,14 @@ <h2 id="scanning-protocols">Scanning protocols<a class="headerlink" href="#scann
<td>03:08</td>
</tr>
<tr>
<td><abbr title="echo-planar imaging">EPI</abbr> <abbr title="blood-oxygen-level dependent">BOLD</abbr> (<span class="arithmatex">\(B_\text{0}\)</span> field mapping)</td>
<td>00:27</td>
<td><abbr title="blood-oxygen-level dependent">BOLD</abbr> (positive-control task <abbr title="functional MRI">fMRI</abbr>)</td>
<td>03:07</td>
<td><abbr title="blood-oxygen-level dependent">BOLD</abbr> (multi-echo <abbr title="resting-state fMRI">RSfMRI</abbr>, eyes open, <strong>only ███</strong>)</td>
<td>10:09</td>
</tr>
<tr>
<td><abbr title="blood-oxygen-level dependent">BOLD</abbr> (positive-control task <abbr title="functional MRI">fMRI</abbr>)</td>
<td>03:07</td>
<td><abbr title="echo-planar imaging">EPI</abbr> <abbr title="blood-oxygen-level dependent">BOLD</abbr> (<span class="arithmatex">\(B_\text{0}\)</span> field mapping)</td>
<td>00:27</td>
<td><abbr title="diffusion weighted imaging">DWI</abbr> (<abbr title="diffusion MRI">dMRI</abbr>, structural connectivity)</td>
<td>27:31</td>
</tr>
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2 changes: 1 addition & 1 deletion data-collection/participant-prep/index.html
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Expand Up @@ -1293,7 +1293,7 @@ <h2 id="preparation-of-the-scanning-protocol-control-console">Preparation of the
<p><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Load the adequate protocol, making sure of loading the right phase-encoding (<abbr title="phase-encoding">PE</abbr>) direction corresponding to the session.</p>
<details class="important" open="open">
<summary>Session schedule</summary>
<p>Today is <mark>2023-10-24 07:18</mark>:</p>
<p>Today is <mark>2023-10-24 08:56</mark>:</p>
<table>
<thead>
<tr>
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6 changes: 3 additions & 3 deletions data-collection/pre-session/index.html
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Expand Up @@ -1568,8 +1568,8 @@ <h2 id="back-outside-the-scanner-room-control-room">Back OUTSIDE THE SCANNER ROO
<li class="task-list-item">
<p><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Check that you can send trigger events manually:</p>
<ul class="task-list">
<li class="task-list-item"><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Enter the "Synchronization" menu by selecting it and pushing the enter button <span class="twemoji bluecolor"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M256 512a256 256 0 1 0 0-512 256 256 0 1 0 0 512z"/></svg></span>.</li>
<li class="task-list-item"><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Hit the down arrow button <span class="twemoji bluecolor"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 320 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M137.4 374.6c12.5 12.5 32.8 12.5 45.3 0l128-128c9.2-9.2 11.9-22.9 6.9-34.9S301 191.9 288 191.9L32 192c-12.9 0-24.6 7.8-29.6 19.8s-2.2 25.7 6.9 34.9l128 128z"/></svg></span> until you find "Send trigger"</li>
<li class="task-list-item"><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Enter the <span class="syncbox">Synchronization</span> mode by selecting it and pushing the enter button <span class="twemoji bluecolor"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M256 512a256 256 0 1 0 0-512 256 256 0 1 0 0 512z"/></svg></span>.</li>
<li class="task-list-item"><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Hit the down arrow button <span class="twemoji bluecolor"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 320 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M137.4 374.6c12.5 12.5 32.8 12.5 45.3 0l128-128c9.2-9.2 11.9-22.9 6.9-34.9S301 191.9 288 191.9L32 192c-12.9 0-24.6 7.8-29.6 19.8s-2.2 25.7 6.9 34.9l128 128z"/></svg></span> until you find <span class="syncbox">Send trigger</span></li>
<li class="task-list-item"><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Push the enter button <span class="twemoji bluecolor"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M256 512a256 256 0 1 0 0-512 256 256 0 1 0 0 512z"/></svg></span> every time you want to send an <span class="keypress">s</span> character.</li>
<li class="task-list-item"><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Check that the <em>███</em> laptop types those triggers (e.g., on an open editor receiving keypresses, or the shell prompt).</li>
<li class="task-list-item"><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Check that the BIOPAC is properly registering the trigger too. Every trigger sent should be seen in the <em>AcqKnowledge</em> GUI.</li>
Expand All @@ -1578,7 +1578,7 @@ <h2 id="back-outside-the-scanner-room-control-room">Back OUTSIDE THE SCANNER ROO
<li class="task-list-item">
<p><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Start the syncbox session:</p>
<ul class="task-list">
<li class="task-list-item"><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Push the up arrow button <span class="twemoji bluecolor"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 320 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M182.6 137.4c-12.5-12.5-32.8-12.5-45.3 0l-128 128c-9.2 9.2-11.9 22.9-6.9 34.9S19 320.1 32 320.1h256c12.9 0 24.6-7.8 29.6-19.8s2.2-25.7-6.9-34.9l-128-128z"/></svg></span> until you find "Start session"</li>
<li class="task-list-item"><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Push the up arrow button <span class="twemoji bluecolor"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 320 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M182.6 137.4c-12.5-12.5-32.8-12.5-45.3 0l-128 128c-9.2 9.2-11.9 22.9-6.9 34.9S19 320.1 32 320.1h256c12.9 0 24.6-7.8 29.6-19.8s2.2-25.7-6.9-34.9l-128-128z"/></svg></span> until you find <span class="syncbox">Start Session</span></li>
<li class="task-list-item"><label class="task-list-control"><input type="checkbox"/><span class="task-list-indicator"></span></label> Push the enter button <span class="twemoji bluecolor"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M256 512a256 256 0 1 0 0-512 256 256 0 1 0 0 512z"/></svg></span> and the syncbox will be now waiting for the scanner's trigger signal to forward it.</li>
</ul>
<table>
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