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Merge pull request #100 from SORTEE-Github-Hackathon/RCO-fixes-brackets
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Update 05.use-cases-c.md
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@emmajhudgins
emmajhudgins authored Feb 18, 2022
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Expand Up @@ -51,9 +51,9 @@ First, there are increasing calls for ecological data to be more Findable, Acces
A key component of data reusability is standardizing the ways (e.g., variable names, file formats) that research data are archived in long-term repositories.
Recently, community-led data standardization efforts are taking place on GitHub [@doi:10.1029/2021EA001797], where documents and templates can be version controlled and commented on by the user community [e.g., ESS-DIVE's GitHub Community Space](https://github.com/ess-dive-community).

Ecologists who write code often use the R programming language, and the (rOpenSci)[https://ropensci.org/] community has a well-established software peer review process that involves both rOpenSci's staff software engineers and the broader R user community.
Their (software review GitHub repository)[https://github.com/ropensci/software-review/] provides instructions for submitting an R package for review as well as guidelines for code reviewers.
rOpenSci's efforts have resulted in many well-used R packages for ecology research including rfishbase[@doi:10.1111/j.1095-8649.2012.03464.x] and taxize[@doi:10.12688/F1000RESEARCH.2-191.V2].
Ecologists who write code often use the R programming language, and the [rOpenSci](https://ropensci.org/) community has a well-established software peer review process that involves both rOpenSci's staff software engineers and the broader R user community.
Their [software review GitHub repository](https://github.com/ropensci/software-review/) provides instructions for submitting an R package for review as well as guidelines for code reviewers.
rOpenSci's efforts have resulted in many well-used R packages for ecology research including rfishbase [@doi:10.1111/j.1095-8649.2012.03464.x] and taxize [@doi:10.12688/F1000RESEARCH.2-191.V2].

Lastly, [GitHub gists](https://gist.github.com/) let users create and share snippets of code, notes, and files quickly.
Rather than create an entire GitHub repository for saving a small code chunk you want to use in a presentation or share with a colleague, GitHub gists provide a lightweight way to write, save, and share code.
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@emmajhudgins
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@emmajhudgins emmajhudgins commented on baa8450 Feb 18, 2022 •
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@robcrystalornelas the failure seems related to this, an issue with the package versions used by manubot

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Thanks for finding that @emmajhudgins. Seems like changing the version of the package in the actions settings might be necessary. @pedrohbraga just making sure you see the discussion that @emmajhudgins linked to.

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