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Create list of exemplar single cell models in NeuroML2 #126

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pgleeson opened this issue Jan 31, 2020 · 2 comments
Open

Create list of exemplar single cell models in NeuroML2 #126

pgleeson opened this issue Jan 31, 2020 · 2 comments

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@pgleeson
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pgleeson commented Jan 31, 2020

As requested by @gidili, a list of some NML2 models with just a single cell and a current input (leading to some reasonable behaviour, and ideally executable on OSB), which can be used for various testing purposes.

Abstract cells
Izhikevich LEMS NML2 OSB
FitzHugh-Nagumo LEMS NML2 OSB
Brunel 2000 (spiking input to I&F cell!) LEMS NML2 OSB
xxx LEMS NML2 OSB
xxx LEMS NML2 OSB
1 compartment, conductance based
Hodgkin Huxley LEMS NML2 OSB
Minimal HH models Pospischil et al. 2008 LEMS NML2 OSB
Cerebellar Granule cell, Maex & De Schutter 1998 LEMS NML2 OSB
Wang & Buzsaki 1996 LEMS NML2 OSB
C. elegans Muscle model Boyle & Cohen 2008 (2 inputs!) LEMS NML2 OSB
Multicompartmental
Hay et al. 2011 L2/3 Pyramidal cell LEMS NML2 OSB
Smith et al. 2013 L2/3 pyramidal cell LEMS NML2 OSB
Allen Cell Types DB cell LEMS NML2 OSB
@pgleeson
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More will be added next week...

@pgleeson
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@dilawar this might be useful for you also for Moose testing.

@github-project-automation github-project-automation bot moved this to 🆕 New in NeuroML backlog Oct 2, 2023
@sanjayankur31 sanjayankur31 moved this from 🆕 New to 📋 Backlog in NeuroML backlog Oct 18, 2023
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