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Update README.md
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MicheleBortol authored Sep 5, 2024
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Expand Up @@ -92,7 +92,7 @@ Only files attached to the dataset/image are available in the form.
The following fields are available:
- `Config file name` (required, "VitessceConfig-YYYY.MM.DD_HHMMSS.json"): Name of the config file to attach, a ".json" extension is added if missing.
- `Image` (required): OMERO Image to view.
- `Segmentation` (optional, `None`): Segmentation to overlay on the image, OME-NGFF images only.
- `Segmentation` (optional, `None`): Label image to overlay on the image, pixel values correspond to cell identities.
- `Cell identities` (optional, `None`): `.csv` file with at least 2 columns: `Cell id column` and `Label column` defined in the 2 fileds below.
- `Cell id column` (optional, "cell_id"): Name of the `Cell id column` used in `Cell identities`, `Expression`, `Embeddings`.
- `Label column` (optional, "label"): Name of the `Label` used in `Cell identities`.
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