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Expanded sequence sorting #876

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merged 7 commits into from
Apr 24, 2023
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@cohansen cohansen commented Apr 18, 2023

Closes #866
Closes #879

  • Review: By commit
  • Merge strategy: Merge (no squash)

Description

Adds a new timeSorted flag to the sequence metadata and adds sorting if every command is EPOCH_RELATIVE.

Verification

Updated existing tests and added new tests.

Documentation

NA

Future work

Possibly more sorting behavior? Hopefully this catches all of the valid cases.

@cohansen cohansen requested a review from goetzrrGit April 18, 2023 16:40
@cohansen cohansen requested a review from a team as a code owner April 18, 2023 16:40
@cohansen cohansen self-assigned this Apr 18, 2023
@cohansen cohansen requested a review from JoelCourtney April 18, 2023 16:40
@cohansen cohansen temporarily deployed to e2e-test April 18, 2023 16:40 — with GitHub Actions Inactive
@camargo camargo added feature A new feature or feature request sequencing Anything related to the sequencing domain labels Apr 18, 2023
@camargo camargo changed the title Feature/expanded sequence sorting Expanded sequence sorting Apr 18, 2023
@cohansen cohansen force-pushed the feature/expanded-sequence-sorting branch from 9df8cfe to 7708fd6 Compare April 18, 2023 17:35
@cohansen cohansen temporarily deployed to e2e-test April 18, 2023 17:35 — with GitHub Actions Inactive
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@camargo camargo left a comment

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Tested locally, LGTM

@cohansen cohansen force-pushed the feature/expanded-sequence-sorting branch from 7708fd6 to 516e4dc Compare April 20, 2023 15:00
@cohansen cohansen temporarily deployed to e2e-test April 20, 2023 15:00 — with GitHub Actions Inactive
@cohansen cohansen temporarily deployed to e2e-test April 24, 2023 17:58 — with GitHub Actions Inactive
@cohansen cohansen temporarily deployed to e2e-test April 24, 2023 20:14 — with GitHub Actions Inactive
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@cartermak cartermak left a comment

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LGTM, thanks for taking the time to workshop the details!

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camargo commented Apr 24, 2023

Thanks so much for taking a look @cartermak, it's super helpful

@cohansen cohansen force-pushed the feature/expanded-sequence-sorting branch from 12bd491 to 91eb228 Compare April 24, 2023 20:30
@cohansen cohansen temporarily deployed to e2e-test April 24, 2023 20:31 — with GitHub Actions Inactive
@cohansen cohansen merged commit 299db31 into develop Apr 24, 2023
@cohansen cohansen deleted the feature/expanded-sequence-sorting branch April 24, 2023 21:32
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