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[BUG]SOFT Parser skips entities #72

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kMutagene opened this issue Sep 16, 2019 · 1 comment
Closed

[BUG]SOFT Parser skips entities #72

kMutagene opened this issue Sep 16, 2019 · 1 comment
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@kMutagene
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bug project-IO Issues regarding the BioFSharp.IO project

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@kMutagene
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Describe the bug
The SOFT parser skips entities of the same type that are listed directly beneath each other, e.g. the list
^Sample1
..
^Sample2
..
^Sample3

gets parsed as [Sample1;Sample3]

To Reproduce
Parse a SOFT family file with multiple sample entries

Expected behavior
all samples should be parsed (this is in fact absolutely necessary)

Additional context
Fix is underway
@kMutagene kMutagene added the bug label Sep 16, 2019
@kMutagene kMutagene self-assigned this Sep 16, 2019
@kMutagene kMutagene added the project-IO Issues regarding the BioFSharp.IO project label Sep 16, 2019
kMutagene added a commit that referenced this issue Sep 16, 2019
@kMutagene
#72 : Fix SOFT parser skipping entities
cc3a3f9
@kMutagene
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Should be fixed with cc3a3f9

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bug project-IO Issues regarding the BioFSharp.IO project
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@kMutagene