Add BioFSharp.Mz dependency

CSBiology · Feb 19, 2021 · 15f96f0 · 15f96f0
1 parent cd60fdb
commit 15f96f0
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Showing 2 changed files with 5 additions and 3 deletions.
diff --git a/docs/JP08_Centroidisation.fsx b/docs/JP08_Centroidisation.fsx
@@ -26,6 +26,7 @@ explained under quantification in the following section.
 #r "nuget: BioFSharp, 2.0.0-beta5"
 #r "nuget: BioFSharp.IO, 2.0.0-beta5"
 #r "nuget: Plotly.NET, 2.0.0-beta6"
+#r "nuget: BioFSharp.Mz, 0.1.5-beta"
 
 #if IPYNB
 #r "nuget: Plotly.NET, 2.0.0-beta6"
@@ -57,12 +58,12 @@ let ms1PeakPicking (mzData:float []) (intensityData: float []) =
         let paddingParams = 
             SignalDetection.Padding.createPaddingParameters paddYValue (Some 7) 0.05 150 95.
         let waveletParameters = 
-            SignalDetection.Wavelet.createWaveletParameters 10 paddYValue 0.1 90. 1.
+            SignalDetection.Wavelet.createWaveletParameters 10 paddYValue 0.1 90. 1. false false
 
         let paddedMz,paddedIntensity = 
             SignalDetection.Padding.paddDataBy paddingParams mzData intensityData
 
-        BioFSharp.Mz.SignalDetection.Wavelet.toCentroidWithRicker2D waveletParameters paddedMz paddedIntensity
+        BioFSharp.Mz.SignalDetection.Wavelet.toCentroidWithRicker2D waveletParameters paddedMz paddedIntensity 
 
 
 (**

diff --git a/docs/JP11_Quantification.fsx b/docs/JP11_Quantification.fsx
@@ -1,5 +1,5 @@
 (**
-# Quantification
+# JP11 Quantification
 
 1. [Quantification Theory](#Quantification-Theory)<br>
     1. [Targeted quantification](#Targeted-quantification)
@@ -107,6 +107,7 @@ Let’s start and extract a XIC…
 #r "nuget: BioFSharp.IO, 2.0.0-beta5"
 #r "nuget: Plotly.NET, 2.0.0-beta6"
 #r "nuget: System.Data.SQLite, 1.0.113.7"
+#r "nuget: BioFSharp.Mz, 0.1.5-beta"
 
 #if IPYNB
 #r "nuget: Plotly.NET, 2.0.0-beta6"