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@BV-BRC

Bacterial and Viral Bioinformatics Resource Center

Software repository for the Bacterial and Viral Bioinformatics Resource Center (BV-BRC) project.

The Bacterial and Viral Bioinformatics Resource Center (BV-BRC) is an information system designed to support the biomedical research community’s work on bacterial and viral infectious diseases via integration of vital pathogen information with rich data and analysis tools. BV-BRC combines the data, technology, and extensive user communities from two long-running centers: PATRIC, the bacterial system , and IRD/ViPR, the viral systems. In addition to hundreds of thousands of bacterial genomes in PATRIC and over a million viral genomes in IRD/ViPR, the two resources host data on protein structure and function, clinical studies, drug targets and resistance, epidemiology, and other features, and provide open source tools for data analysis and genomic annotation.

Learn more about BV-BRC.

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  1. BV-BRC-Web BV-BRC-Web Public

    The BV-BRC Web Application

    JavaScript 7 24

  2. BV-BRC-Docs BV-BRC-Docs Public

    The BV-BRC Documentation

    Python 3 11

  3. BV-BRC-CLI BV-BRC-CLI Public

    The BV-BRC Command Line Interface

    9 1

  4. BV-BRC-API BV-BRC-API Public

    This repository contains source code for BV-BRC Data API service

    CSS 5 12

Repositories

Showing 10 of 86 repositories
  • BV-BRC-Web Public

    The BV-BRC Web Application

    BV-BRC/BV-BRC-Web’s past year of commit activity
    JavaScript 7 MIT 24 1 5 Updated Dec 14, 2024
  • runtime_build Public
    BV-BRC/runtime_build’s past year of commit activity
    Perl 0 MIT 1 0 0 Updated Dec 11, 2024
  • BV-BRC-Docs Public

    The BV-BRC Documentation

    BV-BRC/BV-BRC-Docs’s past year of commit activity
    Python 3 11 0 0 Updated Dec 10, 2024
  • BV-BRC-API Public

    This repository contains source code for BV-BRC Data API service

    BV-BRC/BV-BRC-API’s past year of commit activity
    CSS 5 MIT 12 2 9 Updated Dec 10, 2024
  • BV-BRC/bvbrc_viral_assembly’s past year of commit activity
    Makefile 0 1 0 0 Updated Dec 10, 2024
  • BV-BRC/bvbrc_subspecies_classification’s past year of commit activity
    Perl 1 3 0 0 Updated Dec 9, 2024
  • p3_metagenomic_read_mapping Public

    PATRIC metagenomic read mapping service

    BV-BRC/p3_metagenomic_read_mapping’s past year of commit activity
    Perl 0 1 0 0 Updated Dec 6, 2024
  • BV-BRC-Solr Public

    BV-BRC Solr Cloud schema repo

    BV-BRC/BV-BRC-Solr’s past year of commit activity
    Shell 2 5 0 0 Updated Nov 22, 2024
  • p3_assembly Public
    BV-BRC/p3_assembly’s past year of commit activity
    Python 0 MIT 4 0 0 Updated Nov 11, 2024
  • p3_cli Public

    PATRIC command line interface scripts

    BV-BRC/p3_cli’s past year of commit activity
    Perl 1 5 0 0 Updated Nov 11, 2024