Skip to content
View AliciaSchep's full-sized avatar

Block or report AliciaSchep

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
AliciaSchep/README.md

Hi there 👋

Most of my work tied to my current and last few $JOB roles isn't public, but I developed some open source R and python packages during my time as a PhD student at Stanford in the Greenleaf Lab and have contributed to a few projects on the side since.

My graduate school projects are the ones in the pinned repositories that are part of the GreenleafLab organization. During graduate school I also developed as part of an internship with Genentech the iheatmapr package for interactive heatmaps in R.

Most of my side projects are around data visualization -- I've contributed to the vegawidget ecoysystem of R packages, and created the vegabrite package, which is a port of vega-lite to R via an auto-generated api.

Pinned Loading

  1. ropensci/iheatmapr ropensci/iheatmapr Public

    Complex, interactive heatmaps in R

    R 267 36

  2. vegawidget/vegabrite vegawidget/vegabrite Public

    Build vega-lite specs in R

    R 47 2

  3. gglabeller gglabeller Public

    Shiny gadget for labeling points on ggplot

    R 186 19

  4. GreenleafLab/chromVAR GreenleafLab/chromVAR Public

    chromatin Variability Across Regions (of the genome!)

    R 162 38

  5. GreenleafLab/NucleoATAC GreenleafLab/NucleoATAC Public

    nucleosome calling using ATAC-seq

    Python 106 31

  6. GreenleafLab/motifmatchr GreenleafLab/motifmatchr Public

    Fast motif matching in R

    C++ 43 11