doc: remove wrong statements about bootstrap (#126)

xrobin · Feb 14, 2024 · 80b259f · 80b259f
1 parent f03d246
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Showing 6 changed files with 4 additions and 12 deletions.
diff --git a/man/ci.Rd b/man/ci.Rd
@@ -14,8 +14,6 @@
 \description{
   This function computes the confidence interval (CI) of a ROC curve. The
   \code{of} argument controls the type of CI that will be computed.
-  By default, the 95\% CI are computed with 2000 stratified bootstrap
-  replicates.
 }
 \usage{
 ci(...)

diff --git a/man/ci.auc.Rd b/man/ci.auc.Rd
@@ -15,8 +15,7 @@
 
 \description{
   This function computes the confidence interval (CI) of an area under
-  the curve (AUC). By default, the 95\% CI is computed with 2000
-  stratified bootstrap replicates.
+  the curve (AUC).
 }
 
 \usage{
@@ -89,10 +88,9 @@ progress=getOption("pROCProgress")$name, parallel=FALSE, ...)
   or a formula (response~predictor) arguments, the \code{\link{roc}}
   function is called to build the ROC curve first.
 
-  The default is to use
-  \dQuote{delong} method except for comparison of partial AUC and smoothed
-  curves, where \code{bootstrap} is used. Using \dQuote{delong} for
-  partial AUC and smoothed ROCs is not supported.
+  The default is to use the \dQuote{delong} method, except for comparison of
+  partial AUC and smoothed curves, where \code{bootstrap} is used. Using
+  \dQuote{delong} for partial AUC and smoothed ROCs is not supported.
 
   With \code{method="bootstrap"}, the function calls \code{\link{auc}}
   \code{boot.n} times. For more details about the bootstrap, see the Bootstrap section in

diff --git a/man/ci.coords.Rd b/man/ci.coords.Rd
@@ -13,7 +13,6 @@
 \description{
   This function computes the confidence interval (CI) of the coordinates
   of a ROC curves with the \code{\link{coords}} function.
-  By default, the 95\% CI are computed with 2000 stratified bootstrap replicates.
 }
 
 \usage{

diff --git a/man/ci.se.Rd b/man/ci.se.Rd
@@ -13,7 +13,6 @@
 \description{
   This function computes the confidence interval (CI) of the sensitivity
   at the given specificity points.
-  By default, the 95\% CI are computed with 2000 stratified bootstrap replicates.
 }
 
 \usage{

diff --git a/man/ci.sp.Rd b/man/ci.sp.Rd
@@ -13,7 +13,6 @@
 \description{
   This function computes the confidence interval (CI) of the specificity
   at the given sensitivity points.
-  By default, the 95\% CI are computed with 2000 stratified bootstrap replicates.
 }
 
 \usage{

diff --git a/man/ci.thresholds.Rd b/man/ci.thresholds.Rd
@@ -13,7 +13,6 @@
 \description{
   This function computes the confidence interval (CI) of the sensitivity
   and specificity of the thresholds given in argument.
-  By default, the 95\% CI are computed with 2000 stratified bootstrap replicates.
 }
 
 \usage{