-
Notifications
You must be signed in to change notification settings - Fork 5
/
Dockerfile
41 lines (35 loc) · 1.38 KB
/
Dockerfile
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
FROM rocker/verse:3.6.3-ubuntu18.04
MAINTAINER "Robert Ladwig" [email protected] "ARYAN ADHLAKHA" [email protected]
RUN apt-get update -qq && apt-get -y --no-install-recommends install \
gfortran-8 \
gfortran \
libgd-dev \
git \
build-essential \
libnetcdf-dev \
ca-certificates \
&& update-ca-certificates
RUN Rscript -e 'install.packages("ncdf4")' \
&& Rscript -e 'install.packages("devtools")' \
&& Rscript -e 'devtools::install_github("robertladwig/GLM3r",ref="v3.1.1")' \
&& Rscript -e 'devtools::install_github("USGS-R/glmtools")' \
&& Rscript -e 'devtools::install_github("GLEON/rLakeAnalyzer")' \
&& Rscript -e 'install.packages("lubridate")' \
&& Rscript -e 'install.packages("reshape2")' \
&& Rscript -e 'install.packages("zoo")' \
&& Rscript -e 'install.packages("ggplot2")' \
&& Rscript -e 'install.packages("tidyverse")' \
RUN echo "rstudio ALL=(ALL) NOPASSWD:ALL">>/etc/sudoers
RUN mkdir /home/rstudio/workshop
WORKDIR /home/rstudio/workshop
COPY workshop-glm.R /home/rstudio/workshop/
RUN chmod -R 777 .
COPY example /home/rstudio/workshop/example
WORKDIR /home/rstudio/workshop/example
RUN chmod -R 777 .
COPY buildyourownmodel /home/rstudio/workshop/buildyourownmodel
WORKDIR /home/rstudio/workshop/buildyourownmodel
RUN chmod -R 777 .
COPY rserver.conf /etc/rstudio/rserver.conf
RUN apt-get update && apt-get install -y python3-pip
RUN pip3 install py-cdrive-api