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README.md

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An R package powered by PRIDE web api. It allows r-users to retrieve project summary, detail, assay and files using PRIDE accession-ID. It uses PRIDE web API and httr package to download the content.

Install

library('devtools')
install_github('rintukutum/rpride')

Get information about a PRIDE project

# load rpride library
library('rpride')
# PRIDE ID
pxd <- 'PXD000561'
project.info <- get.project.detail(pxd)

Get all PRIDE projects

pride_projects <- get.pride.projects()