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Using results in dropseq pipeline ? #20

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colindaven opened this issue Feb 8, 2019 · 0 comments
Open

Using results in dropseq pipeline ? #20

colindaven opened this issue Feb 8, 2019 · 0 comments

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@colindaven
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Dear all

does anyone know how to use the results further ? It doesn't look like they can be plugged into dropseqpipe or similar. It's a shame since it looks like a useful tool, or maybe I'm missing something.

It could be that I have not used kallisto yet, so this step might give me the output I need, albeit without the very nice QC information from the dropseqpipe pipeline.

Colin
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