InstaDeep Ltd

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55 repositories

InstaNovo
Public
De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments
Python
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Apache License 2.0
•7•51•6•2•Updated Dec 16, 2024Dec 16, 2024
InstaGeo-E2E-Geospatial-ML
Public
A python package for end-to-end geospatial machine learning using multispectral earth observation data such as NASA HLS.
deep-learning geospatial remote-sensing
Python
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Other
•3•8•0•0•Updated Dec 13, 2024Dec 13, 2024
Mava
Public
🦁 A research-friendly codebase for fast experimentation of multi-agent reinforcement learning in JAX
research reinforcement-learning multiagent multi-agent-systems jax multi-agent-reinforcement-learning marl
Python
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Apache License 2.0
•91•749•15•4•Updated Dec 13, 2024Dec 13, 2024
flashbax
Public
⚡ Flashbax: Accelerated Replay Buffers in JAX
machine-learning reinforcement-learning hpc buffers rl jax off-policy
Python
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Apache License 2.0
•12•216•6•1•Updated Dec 10, 2024Dec 10, 2024
jumanji
Public
🕹️ A diverse suite of scalable reinforcement learning environments in JAX
python research reinforcement-learning jax
Python
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Apache License 2.0
•83•659•25•4•Updated Dec 9, 2024Dec 9, 2024
aichor-demo
Public
Collection of smoke test with any operator, for AIchor platform
Python
•15•1•0•1•Updated Dec 4, 2024Dec 4, 2024
matrax
Public
A collection of matrix games in JAX
jax matrix-game multi-agent-reinforcement-learning
Python
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Apache License 2.0
•3•10•0•0•Updated Nov 28, 2024Nov 28, 2024
memento
Public
Official Implementation of Memento
Python
•1•18•0•1•Updated Nov 19, 2024Nov 19, 2024
metalic
Public
Meta in-context learning for protein fitness prediction
Python
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Apache License 2.0
•1•7•1•1•Updated Nov 12, 2024Nov 12, 2024
og-marl
Public
Datasets with baselines for offline multi-agent reinforcement learning.
reinforcement-learning multi-agent-reinforcement-learning offline-reinforcement-learning
Python
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Apache License 2.0
•13•153•1•0•Updated Nov 10, 2024Nov 10, 2024
marl-eval
Public
A tool for aggregating and plotting MARL experiment data.
experiment benchmarking research reinforcement-learning evaluation multi-agent-systems multi-agent-reinforcement-learning marl
Python
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Apache License 2.0
•6•64•4•2•Updated Nov 4, 2024Nov 4, 2024
openfold-internal
Public
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
Python
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Apache License 2.0
•550•0•0•1•Updated Oct 23, 2024Oct 23, 2024
SKAInnotate
Public
JavaScript
•1•1•1•0•Updated Oct 9, 2024Oct 9, 2024
protein-sequence-bfn
Public
Supporting code for our paper "Protein Sequence Modelling with Bayesian Flow Networks"
protein-sequence bayesian-flow-networks bfns
Python
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Other
•2•20•0•0•Updated Oct 7, 2024Oct 7, 2024
nucleotide-transformer
Public
🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
deep-learning genomics dna transformer language-model nucleotide
Python
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Other
•59•525•9•0•Updated Oct 1, 2024Oct 1, 2024
Software-Tester-Interview-Questions
Public template
This is a refactoring kata for improving your coding skills
C#
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MIT License
•270•0•0•0•Updated Sep 24, 2024Sep 24, 2024
keras-io
Public
Keras documentation, hosted live at keras.io
Jupyter Notebook
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Apache License 2.0
•2.1k•0•0•0•Updated Aug 20, 2024Aug 20, 2024
protein-structure-tokenizer
Public
Official implementation of "Learning the language of protein structures"
Python
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Apache License 2.0
•0•10•3•0•Updated Aug 7, 2024Aug 7, 2024
multiomics-open-research
Public
BulkRNABert: Cancer prognosis from bulk RNA-seq based language models
Python
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Other
•3•10•2•0•Updated Jul 18, 2024Jul 18, 2024
compass
Public
🧭 COMPASS: Combinatorial Optimization with Policy Adaptation using Latent Space Search
Python
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Other
•2•32•1•0•Updated Jun 21, 2024Jun 21, 2024
amld-africa-2021
Public
Repository for the workshop at AMLD Africa 2021.
rl marl
Jupyter Notebook
•1•3•0•0•Updated Jun 18, 2024Jun 18, 2024
mistral-finetune
Public
Python
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Apache License 2.0
•237•0•0•0•Updated Jun 17, 2024Jun 17, 2024
railsim_rl
Public
Python
•0•0•0•0•Updated Jun 13, 2024Jun 13, 2024
matsim-libs
Public
Multi-Agent Transport Simulation
Java
•452•1•0•1•Updated Jun 13, 2024Jun 13, 2024
DebateLLM
Public
Benchmarking Multi-Agent Debate between Language Models for Truthfulness in Q&A.
Jupyter Notebook
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Apache License 2.0
•2•23•1•1•Updated May 27, 2024May 27, 2024
bioclip
Public
Contrasting Sequence with Structure: Pre-training Graph Representations with PLMs
Python
•2•22•1•1•Updated Mar 22, 2024Mar 22, 2024
poppy
Public
🌺 Population-Based Reinforcement Learning for Combinatorial Optimization
Python
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Apache License 2.0
•13•65•0•0•Updated Feb 12, 2024Feb 12, 2024
FrameDiPT
Public
FrameDiPT: an SE(3) diffusion model for protein structure inpainting
protein-structure generative-model tcr inpainting protein-folding diffusion-models alphafold2 loop-design
Jupyter Notebook
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Other
•6•52•0•0•Updated Jan 22, 2024Jan 22, 2024
LightMHC
Public
LightMHC: A Light Model for pMHC Structure Prediction with Graph Neural Networks
protein-structure graphneuralnetwork pmhc alphafold2
Python
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Other
•0•12•4•0•Updated Jan 9, 2024Jan 9, 2024
skai
Public
SKAI is a machine learning based tool for performing automatic building damage assessments on aerial imagery of disaster sites.
Python
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Apache License 2.0
•17•1•0•0•Updated Dec 15, 2023Dec 15, 2023