From 1aa73a0cec4f51609feaaee2fabccc31930f5659 Mon Sep 17 00:00:00 2001 From: spieschnik <110470003+spieschnik@users.noreply.github.com> Date: Fri, 25 Oct 2024 11:52:55 +0200 Subject: [PATCH 1/4] Create CA4FieldOfHippocampus.jsonld --- .../CA4FieldOfHippocampus.jsonld | 25 +++++++++++++++++++ 1 file changed, 25 insertions(+) create mode 100644 instances/latest/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld diff --git a/instances/latest/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld b/instances/latest/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld new file mode 100644 index 000000000..f611fe1b4 --- /dev/null +++ b/instances/latest/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld @@ -0,0 +1,25 @@ +{ + "@context": { + "@vocab": "https://openminds.om-i.org/props/" + }, + "@id": "https://openminds.om-i.org/instances/UBERONParcellation/CA4FieldOfHippocampus", + "@type": "https://openminds.om-i.org/types/UBERONParcellation", + "definition": "The last region in the cornu ammonis of the hippocampus and part of the hilus of the dental gyrus. Mostly contains mossy cells, that receive inputs from the dentate gyrus and pyramidal cells in the CA3 region and projects back to the dentate gyrus [taken from [Interlex](http://uri.interlex.org/base/ilx_0734458)]." + "description": null, + "interlexIdentifier": "http://uri.interlex.org/base/ilx_0734458", + "knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0003884#ca4-field-of-hippocampus", + "name": "CA4 field of hippocampus", + "preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0003884", + "synonym": [ + "regio IV cornus ammonis", + "CA4 field", + "region IV of ammon's horn", + "region IV of hippocampus proper", + "CA4 field of Ammon's horn", + "hippocampus CA4", + "region 4 of Ammon's horn", + "CA4", + "CA4 field of cornu ammonis", + "regio IV hippocampi proprii" + ] +} From 588b1e64aff419e23bdbac5e59f6260f3d31bde1 Mon Sep 17 00:00:00 2001 From: spieschnik <110470003+spieschnik@users.noreply.github.com> Date: Wed, 30 Oct 2024 10:42:00 +0100 Subject: [PATCH 2/4] Update CA4FieldOfHippocampus.jsonld revised to fit other UBERON parcellations --- .../CA4FieldOfHippocampus.jsonld | 18 +++++++++--------- 1 file changed, 9 insertions(+), 9 deletions(-) diff --git a/instances/latest/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld b/instances/latest/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld index f611fe1b4..9017fff5c 100644 --- a/instances/latest/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld +++ b/instances/latest/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld @@ -4,22 +4,22 @@ }, "@id": "https://openminds.om-i.org/instances/UBERONParcellation/CA4FieldOfHippocampus", "@type": "https://openminds.om-i.org/types/UBERONParcellation", - "definition": "The last region in the cornu ammonis of the hippocampus and part of the hilus of the dental gyrus. Mostly contains mossy cells, that receive inputs from the dentate gyrus and pyramidal cells in the CA3 region and projects back to the dentate gyrus [taken from [Interlex](http://uri.interlex.org/base/ilx_0734458)]." - "description": null, - "interlexIdentifier": "http://uri.interlex.org/base/ilx_0734458", + "definition": "Is a hippocampal field. [auto-generated from 'is_a' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003884)]", + "description": "The last of four regions in the cornu ammonis of the hippocampus and is also part of the hilus of the dentate gyrus. This area contains mostly mossy cells that receive inputs from the dentate gyrus and pyramidal cells in the CA3 region and also projects back to the dentate gyrus. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003884)]", + "interlexIdentifier": null, "knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0003884#ca4-field-of-hippocampus", "name": "CA4 field of hippocampus", "preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0003884", "synonym": [ - "regio IV cornus ammonis", + "CA4", "CA4 field", - "region IV of ammon's horn", - "region IV of hippocampus proper", "CA4 field of Ammon's horn", + "CA4 field of cornu ammonis", "hippocampus CA4", + "regio IV cornus ammonis", + "regio IV hippocampi proprii", "region 4 of Ammon's horn", - "CA4", - "CA4 field of cornu ammonis", - "regio IV hippocampi proprii" + "region IV of ammon's horn", + "region IV of hippocampus proper" ] } From 2ce8918d7913621c2b6e74ed41d7c5c38890e40a Mon Sep 17 00:00:00 2001 From: spieschnik <110470003+spieschnik@users.noreply.github.com> Date: Mon, 4 Nov 2024 13:06:42 +0100 Subject: [PATCH 3/4] Create CA4FieldOfHippocampus.jsonld --- .../CA4FieldOfHippocampus.jsonld | 25 +++++++++++++++++++ 1 file changed, 25 insertions(+) create mode 100644 instances/v3.0/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld diff --git a/instances/v3.0/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld b/instances/v3.0/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld new file mode 100644 index 000000000..bc12f2bc9 --- /dev/null +++ b/instances/v3.0/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld @@ -0,0 +1,25 @@ +{ + "@context": { + "@vocab": "https://openminds.ebrains.eu/vocab/" + }, + "@id": "https://openminds.ebrains.eu/instances/UBERONParcellation/CA4FieldOfHippocampus", + "@type": "https://openminds.ebrains.eu/controlledTerms/UBERONParcellation", + "definition": "Is a hippocampal field. [auto-generated from 'is_a' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003884)]", + "description": "The last of four regions in the cornu ammonis of the hippocampus and is also part of the hilus of the dentate gyrus. This area contains mostly mossy cells that receive inputs from the dentate gyrus and pyramidal cells in the CA3 region and also projects back to the dentate gyrus. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003884)]", + "interlexIdentifier": null, + "knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0003884#ca4-field-of-hippocampus", + "name": "CA4 field of hippocampus", + "preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0003884", + "synonym": [ + "CA4", + "CA4 field", + "CA4 field of Ammon's horn", + "CA4 field of cornu ammonis", + "hippocampus CA4", + "regio IV cornus ammonis", + "regio IV hippocampi proprii", + "region 4 of Ammon's horn", + "region IV of ammon's horn", + "region IV of hippocampus proper" + ] +} From 5110401fa8520539abaed087ac4b03435ed47efb Mon Sep 17 00:00:00 2001 From: spieschnik <110470003+spieschnik@users.noreply.github.com> Date: Mon, 4 Nov 2024 13:41:23 +0100 Subject: [PATCH 4/4] Create CA4FieldOfHippocampus.jsonld --- .../CA4FieldOfHippocampus.jsonld | 25 +++++++++++++++++++ 1 file changed, 25 insertions(+) create mode 100644 instances/v4.0/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld diff --git a/instances/v4.0/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld b/instances/v4.0/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld new file mode 100644 index 000000000..9017fff5c --- /dev/null +++ b/instances/v4.0/terminologies/UBERONParcellation/CA4FieldOfHippocampus.jsonld @@ -0,0 +1,25 @@ +{ + "@context": { + "@vocab": "https://openminds.om-i.org/props/" + }, + "@id": "https://openminds.om-i.org/instances/UBERONParcellation/CA4FieldOfHippocampus", + "@type": "https://openminds.om-i.org/types/UBERONParcellation", + "definition": "Is a hippocampal field. [auto-generated from 'is_a' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003884)]", + "description": "The last of four regions in the cornu ammonis of the hippocampus and is also part of the hilus of the dentate gyrus. This area contains mostly mossy cells that receive inputs from the dentate gyrus and pyramidal cells in the CA3 region and also projects back to the dentate gyrus. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003884)]", + "interlexIdentifier": null, + "knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0003884#ca4-field-of-hippocampus", + "name": "CA4 field of hippocampus", + "preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0003884", + "synonym": [ + "CA4", + "CA4 field", + "CA4 field of Ammon's horn", + "CA4 field of cornu ammonis", + "hippocampus CA4", + "regio IV cornus ammonis", + "regio IV hippocampi proprii", + "region 4 of Ammon's horn", + "region IV of ammon's horn", + "region IV of hippocampus proper" + ] +}