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modules.json
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modules.json
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{
"name": "nf-core/rnavar",
"homePage": "https://github.com/nf-core/rnavar",
"repos": {
"nf-core/modules": {
"cat/fastq": {
"git_sha": "9aadd9a6d3f5964476582319b3a1c54a3e3fe7c9"
},
"custom/dumpsoftwareversions": {
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
},
"ensemblvep": {
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
},
"fastqc": {
"git_sha": "49b18b1639f4f7104187058866a8fab33332bdfe"
},
"gatk4/applybqsr": {
"git_sha": "169b2b96c1167f89ab07127b7057c1d90a6996c7"
},
"gatk4/baserecalibrator": {
"git_sha": "169b2b96c1167f89ab07127b7057c1d90a6996c7"
},
"gatk4/bedtointervallist": {
"git_sha": "169b2b96c1167f89ab07127b7057c1d90a6996c7"
},
"gatk4/createsequencedictionary": {
"git_sha": "169b2b96c1167f89ab07127b7057c1d90a6996c7"
},
"gatk4/haplotypecaller": {
"git_sha": "169b2b96c1167f89ab07127b7057c1d90a6996c7"
},
"gatk4/indexfeaturefile": {
"git_sha": "169b2b96c1167f89ab07127b7057c1d90a6996c7"
},
"gatk4/intervallisttools": {
"git_sha": "169b2b96c1167f89ab07127b7057c1d90a6996c7"
},
"gatk4/markduplicates": {
"git_sha": "df2620cfc7e4c21b14ed03c1c928f09fbabf83c4"
},
"gatk4/mergevcfs": {
"git_sha": "169b2b96c1167f89ab07127b7057c1d90a6996c7"
},
"gatk4/splitncigarreads": {
"git_sha": "169b2b96c1167f89ab07127b7057c1d90a6996c7"
},
"gatk4/variantfiltration": {
"git_sha": "169b2b96c1167f89ab07127b7057c1d90a6996c7"
},
"gffread": {
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
},
"gunzip": {
"git_sha": "9aadd9a6d3f5964476582319b3a1c54a3e3fe7c9"
},
"multiqc": {
"git_sha": "49b18b1639f4f7104187058866a8fab33332bdfe"
},
"samtools/faidx": {
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"samtools/flagstat": {
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"samtools/idxstats": {
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"samtools/index": {
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"samtools/merge": {
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"samtools/sort": {
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"samtools/stats": {
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"snpeff": {
"git_sha": "40dd662fd26c3eb3160b7c8cbbe9bff80bbe2c30"
},
"star/align": {
"git_sha": "1dddf1ce9443e3d93853d86e7a7aab52e5b4d614"
},
"star/genomegenerate": {
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"tabix/bgziptabix": {
"git_sha": "49b18b1639f4f7104187058866a8fab33332bdfe"
},
"tabix/tabix": {
"git_sha": "b3e9b88e80880f450ad79a95b2b7aa05e1de5484"
},
"untar": {
"git_sha": "9aadd9a6d3f5964476582319b3a1c54a3e3fe7c9"
}
}
}
}