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Wrong name for post_skid output in catmaid_get_connectors_between() #109

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mmc46 opened this issue Apr 14, 2019 · 0 comments
Closed

Wrong name for post_skid output in catmaid_get_connectors_between() #109

mmc46 opened this issue Apr 14, 2019 · 0 comments

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@mmc46
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mmc46 commented Apr 14, 2019

Using get_names = T, with pre_skids are excitatory uPNs, post_skids Duck and Pigeon.

One VA1v uPN name shows up as a target, even though the skid matches Duck.

duck = catmaid_skids("Duck R")
pigeon = catmaid_skids("Pigeon R")
av1a_fafb = c(duck, pigeon)

inputs_av1a_fafb = catmaid_get_connectors_between(pre_skids = upns_fafbsk, post_skids = av1a_fafb, get_names = T)

table(inputs_av1a_fafb$post_name)

AV1a1#1 2659705 FML Duck - downstream of DL4 
                                         691 
          AV1a1#2 2684793 Pigeon RJVR FML ZM 
                                         302 
                 PN glomerulus VA1v 52107 AA 
 
inputs_av1a_fafb %>% filter(post_skid == av1a_fafb & !(post_name%in%unique(inputs_av1a_fafb$post_name)[2:3]))                                          1 

I assume the skid is correct, and the name is not.

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