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Modification required to work in Julia 1.7 #3

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itcosyne opened this issue Dec 13, 2022 · 1 comment
Closed

Modification required to work in Julia 1.7 #3

itcosyne opened this issue Dec 13, 2022 · 1 comment

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@itcosyne
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Hi,
With the new versions of Julia, you need to do the following modification in the Query.jl file
(It specifies that the file is read into a DataFrame)

function execute(q::Query)
query = HTTP.URIs.escapeuri(string(q.xdoc))
r = HTTP.get(string(BIOMART_URL, "?query=", query))
CSV.read(r.body, DataFrames.DataFrame, delim = '\t')
end

great package, by the way.
Irene

@jonathanBieler
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jonathanBieler commented Jan 5, 2023

@itcosyne thanks for the report, it should be fixed now (you have to do ]up in the package manager). I also cleaned up a few things, I might register this package actually.

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