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Investigate numerical test failures on Hamilton 8 #143

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danielhollas opened this issue Aug 26, 2022 · 1 comment
Open

Investigate numerical test failures on Hamilton 8 #143

danielhollas opened this issue Aug 26, 2022 · 1 comment
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testing Any changes to Github Actions or testing scripts.

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@danielhollas
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danielhollas commented Aug 26, 2022

We tried to compile ABIN on the new Hamilton 8 cluster in Durham on node cn7g03, and we're seeing numerical differences in restart.xyz files for the following tests: PIMD, ABINITIO, SPLINE, MORSE, HARMON All these tests are running PIMD with NHC thermostat. We tried GCC-8 and GCC-11.2.

We have verified that the tests pass on Hamitlon7 head node and also on hamilton7:cn7g02, with gcc-8.2. Given that we have the same compiler version and same CPUs, I don't know what the heck is happening.

Here's the kernel version and ldd output on hatmilton8:g03

$ uname -a
Linux [cn7g03.ham8.dur.ac.uk](http://cn7g03.ham8.dur.ac.uk/) 4.18.0-348.20.1.el8_5.x86_64 #1 SMP Thu Mar 10 20:59:28 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux

$ ldd bin/abin
	libgfortran.so.5 => /lib64/libgfortran.so.5 (0x00007fc26fd48000)
	libm.so.6 => /lib64/libm.so.6 (0x00007fc26f9c6000)
	libstdc++.so.6 => /lib64/libstdc++.so.6 (0x00007fc26f631000)
	libgomp.so.1 => /lib64/libgomp.so.1 (0x00007fc26f3f9000)
	libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00007fc26f1e1000)
	libquadmath.so.0 => /lib64/libquadmath.so.0 (0x00007fc26efa0000)
	libpthread.so.0 => /lib64/libpthread.so.0 (0x00007fc26ed80000)
	libc.so.6 => /lib64/libc.so.6 (0x00007fc26e9bb000)
	libz.so.1 => /lib64/libz.so.1 (0x00007fc26e7a3000)
	/lib64/ld-linux-x86-64.so.2 (0x00007fc2701c7000)
	libdl.so.2 => /lib64/libdl.so.2 (0x00007fc26e59f000)
@danielhollas danielhollas added the testing Any changes to Github Actions or testing scripts. label Aug 26, 2022
@danielhollas danielhollas self-assigned this Aug 26, 2022
@jack-t-taylor
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jack-t-taylor commented Nov 27, 2024

Further to the comment above, we are still seeing numerical differences in restart.xyz files for the following tests when trying to compile ABIN on the Hamilton8 cluster (node cn7g03) in Durham: PIMD, ABINITIO, H2O_SCHWENKE_PIMD, HARMON and MORSE. The same is true also for force.xyz files for MORSE.

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