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Error in .filter(x[mod_genes, ], y[mod_genes, ]) : Insufficient number of features shared between single-cell and mixture dataset. #118

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Angel030331 opened this issue Nov 3, 2024 · 0 comments

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@Angel030331
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I am running the SPOTlight tutorial at https://www.bioconductor.org/packages/release/bioc/vignettes/SPOTlight/inst/doc/SPOTlight_kidney.html

but it has an error

sessionInfo()
[1] scran_1.30.2 scater_1.30.1 scuttle_1.12.0
[4] rhdf5_2.46.1 TabulaMurisSenisData_1.8.0 SPOTlight_1.7.2
[7] ggplot2_3.5.1 TENxVisiumData_1.10.0 SpatialExperiment_1.12.0
[10] SingleCellExperiment_1.24.0 SummarizedExperiment_1.32.0 Biobase_2.62.0
[13] GenomicRanges_1.54.1 GenomeInfoDb_1.38.8 IRanges_2.36.0
[16] S4Vectors_0.40.2 MatrixGenerics_1.14.0 matrixStats_1.4.1
[19] ExperimentHub_2.10.0 AnnotationHub_3.10.1 BiocFileCache_2.10.2
[22] dbplyr_2.5.0 BiocGenerics_0.48.1

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