From 32892a651934d045cda35f82032504f88d825722 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Fri, 2 Sep 2022 12:40:08 +0000 Subject: [PATCH] Merge Test to Stable (#737) (#746) [FIX] Bug where files could not be added to drafts #742 [FIX] Remove test comparing datetime objects #744 [FIX] Draft validation issues #740 [ADD] Support for DOI as preferred identifier #741 [ADD] Support for bulk-delete api operations #725 [ADD] Enable V2 endpoints --- poetry.lock | 340 ++++++++++++++++++++++++++++++++++++------------- pyproject.toml | 2 +- 2 files changed, 255 insertions(+), 87 deletions(-) diff --git a/poetry.lock b/poetry.lock index 7aa4a864..3fd64e76 100644 --- a/poetry.lock +++ b/poetry.lock @@ -6,14 +6,6 @@ category = "main" optional = true python-versions = "*" -[[package]] -name = "appdirs" -version = "1.4.4" -description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." -category = "dev" -optional = false -python-versions = "*" - [[package]] name = "appnope" version = "0.1.3" @@ -34,7 +26,7 @@ python-versions = ">=3.7" typing-extensions = {version = "*", markers = "python_version < \"3.8\""} [package.extras] -tests = ["pytest", "pytest-asyncio", "mypy (>=0.800)"] +tests = ["mypy (>=0.800)", "pytest", "pytest-asyncio"] [[package]] name = "asttokens" @@ -59,10 +51,10 @@ optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" [package.extras] -dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface", "furo", "sphinx", "sphinx-notfound-page", "pre-commit", "cloudpickle"] -docs = ["furo", "sphinx", "zope.interface", "sphinx-notfound-page"] -tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface", "cloudpickle"] -tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "cloudpickle"] +dev = ["cloudpickle", "coverage[toml] (>=5.0.2)", "furo", "hypothesis", "mypy", "pre-commit", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "six", "sphinx", "sphinx-notfound-page", "zope.interface"] +docs = ["furo", "sphinx", "sphinx-notfound-page", "zope.interface"] +tests = ["cloudpickle", "coverage[toml] (>=5.0.2)", "hypothesis", "mypy", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "six", "zope.interface"] +tests_no_zope = ["cloudpickle", "coverage[toml] (>=5.0.2)", "hypothesis", "mypy", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "six"] [[package]] name = "babel" @@ -85,25 +77,26 @@ python-versions = "*" [[package]] name = "black" -version = "20.8b1" +version = "22.8.0" description = "The uncompromising code formatter." category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.6.2" [package.dependencies] -appdirs = "*" -click = ">=7.1.2" +click = ">=8.0.0" mypy-extensions = ">=0.4.3" -pathspec = ">=0.6,<1" -regex = ">=2020.1.8" -toml = ">=0.10.1" -typed-ast = ">=1.4.0" -typing-extensions = ">=3.7.4" +pathspec = ">=0.9.0" +platformdirs = ">=2" +tomli = {version = ">=1.1.0", markers = "python_full_version < \"3.11.0a7\""} +typed-ast = {version = ">=1.4.2", markers = "python_version < \"3.8\" and implementation_name == \"cpython\""} +typing-extensions = {version = ">=3.10.0.0", markers = "python_version < \"3.10\""} [package.extras] colorama = ["colorama (>=0.4.3)"] -d = ["aiohttp (>=3.3.2)", "aiohttp-cors"] +d = ["aiohttp (>=3.7.4)"] +jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"] +uvloop = ["uvloop (>=0.15.2)"] [[package]] name = "certifi" @@ -173,9 +166,9 @@ lxml = ">=4.5.0" requests = ">=2.5.0" [package.extras] -all = ["Sphinx (>=3)", "responses (>=0.10.6)", "mock (>=1.3.0)", "pytest-invenio (>=1.4.0)"] +all = ["Sphinx (>=3)", "mock (>=1.3.0)", "pytest-invenio (>=1.4.0)", "responses (>=0.10.6)"] docs = ["Sphinx (>=3)"] -tests = ["responses (>=0.10.6)", "mock (>=1.3.0)", "pytest-invenio (>=1.4.0)"] +tests = ["mock (>=1.3.0)", "pytest-invenio (>=1.4.0)", "responses (>=0.10.6)"] [[package]] name = "decorator" @@ -275,7 +268,7 @@ urllib3 = ">=1.21.1,<2" [package.extras] async = ["aiohttp (>=3,<4)"] -develop = ["requests (>=2.0.0,<3.0.0)", "coverage", "mock", "pyyaml", "pytest", "pytest-cov", "sphinx (<1.7)", "sphinx-rtd-theme", "black", "jinja2"] +develop = ["black", "coverage", "jinja2", "mock", "pytest", "pytest-cov", "pyyaml", "requests (>=2.0.0,<3.0.0)", "sphinx (<1.7)", "sphinx-rtd-theme"] docs = ["sphinx (<1.7)", "sphinx-rtd-theme"] requests = ["requests (>=2.4.0,<3.0.0)"] @@ -336,9 +329,9 @@ isbnlib = ">=3.10.8" six = ">=1.10" [package.extras] -all = ["Sphinx (>=4.2.0)", "pytest-cache (>=1.0)", "pytest-runner (>=2.6.2)", "pytest-invenio (>=1.4.0)"] +all = ["Sphinx (>=4.2.0)", "pytest-cache (>=1.0)", "pytest-invenio (>=1.4.0)", "pytest-runner (>=2.6.2)"] docs = ["Sphinx (>=4.2.0)"] -tests = ["pytest-cache (>=1.0)", "pytest-runner (>=2.6.2)", "pytest-invenio (>=1.4.0)"] +tests = ["pytest-cache (>=1.0)", "pytest-invenio (>=1.4.0)", "pytest-runner (>=2.6.2)"] [[package]] name = "imagesize" @@ -361,9 +354,9 @@ typing-extensions = {version = ">=3.6.4", markers = "python_version < \"3.8\""} zipp = ">=0.5" [package.extras] -docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)"] +docs = ["jaraco.packaging (>=9)", "rst.linker (>=1.9)", "sphinx"] perf = ["ipython"] -testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.3)", "packaging", "pyfakefs", "flufl.flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)", "importlib-resources (>=1.3)"] +testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)"] [[package]] name = "ipdb" @@ -405,10 +398,10 @@ doc = ["Sphinx (>=1.3)"] kernel = ["ipykernel"] nbconvert = ["nbconvert"] nbformat = ["nbformat"] -notebook = ["notebook", "ipywidgets"] +notebook = ["ipywidgets", "notebook"] parallel = ["ipyparallel"] qtconsole = ["qtconsole"] -test = ["nose (>=0.10.1)", "requests", "testpath", "pygments", "nbformat", "ipykernel", "numpy (>=1.17)"] +test = ["ipykernel", "nbformat", "nose (>=0.10.1)", "numpy (>=1.17)", "pygments", "requests", "testpath"] [[package]] name = "isbnlib" @@ -438,10 +431,10 @@ optional = false python-versions = ">=3.6.1,<4.0" [package.extras] -pipfile_deprecated_finder = ["pipreqs", "requirementslib"] -requirements_deprecated_finder = ["pipreqs", "pip-api"] colors = ["colorama (>=0.4.3,<0.5.0)"] +pipfile_deprecated_finder = ["pipreqs", "requirementslib"] plugins = ["setuptools"] +requirements_deprecated_finder = ["pip-api", "pipreqs"] [[package]] name = "jedi" @@ -488,7 +481,7 @@ six = 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python-versions = ">=3.6" [package.extras] crypto = ["cryptography (>=3.3.1)"] -dev = ["sphinx", "sphinx-rtd-theme", "zope.interface", "cryptography (>=3.3.1)", "pytest (>=6.0.0,<7.0.0)", "coverage[toml] (==5.0.4)", "mypy", "pre-commit"] +dev = ["coverage[toml] (==5.0.4)", "cryptography (>=3.3.1)", "mypy", "pre-commit", "pytest (>=6.0.0,<7.0.0)", "sphinx", "sphinx-rtd-theme", "zope.interface"] docs = ["sphinx", "sphinx-rtd-theme", "zope.interface"] -tests = ["pytest (>=6.0.0,<7.0.0)", "coverage[toml] (==5.0.4)"] +tests = ["coverage[toml] (==5.0.4)", "pytest (>=6.0.0,<7.0.0)"] [[package]] name = "pyoai" @@ -683,7 +688,7 @@ optional = false python-versions = ">=3.6.8" [package.extras] -diagrams = ["railroad-diagrams", "jinja2"] +diagrams = ["jinja2", "railroad-diagrams"] [[package]] name = "pyrsistent" @@ -702,9 +707,9 @@ optional = false python-versions = ">=3.6" [package.extras] -pyyaml = ["pyyaml"] -all = ["ruamel.yaml", "toml", "msgpack"] +all = ["msgpack", "ruamel.yaml", "toml"] msgpack = ["msgpack"] +pyyaml = ["pyyaml"] "ruamel.yaml" = ["ruamel.yaml"] toml = ["toml"] yaml = ["ruamel.yaml"] @@ -761,7 +766,7 @@ six = "*" docs = ["sphinx (<3)", "sphinxcontrib-apidoc"] html = ["html5lib"] sparql = ["requests"] -tests = ["html5lib", "networkx", "nose", "doctest-ignore-unicode"] +tests = ["doctest-ignore-unicode", "html5lib", "networkx", "nose"] [[package]] name = "redis" @@ -774,14 +779,6 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" [package.extras] hiredis = ["hiredis (>=0.1.3)"] -[[package]] -name = "regex" -version = "2022.7.9" -description = "Alternative regular expression module, to replace re." -category = "dev" -optional = false -python-versions = ">=3.6" - [[package]] name = "requests" version = "2.28.1" @@ -814,7 +811,7 @@ six = "*" urllib3 = ">=1.25.10" [package.extras] -tests = ["coverage (>=3.7.1,<6.0.0)", "pytest-cov", "pytest-localserver", "flake8", "types-mock", "types-requests", "types-six", "pytest (>=4.6,<5.0)", "pytest (>=4.6)", "mypy"] +tests = ["coverage (>=3.7.1,<6.0.0)", "flake8", "mypy", "pytest (>=4.6)", "pytest (>=4.6,<5.0)", "pytest-cov", "pytest-localserver", "types-mock", "types-requests", "types-six"] [[package]] name = "six" @@ -861,8 +858,8 @@ sphinxcontrib-serializinghtml = ">=1.1.5" [package.extras] docs = ["sphinxcontrib-websupport"] -lint = ["flake8 (>=3.5.0)", "isort", "mypy (>=0.931)", "docutils-stubs", "types-typed-ast", "types-requests"] -test = ["pytest", "pytest-cov", "html5lib", "cython", "typed-ast"] +lint = ["docutils-stubs", "flake8 (>=3.5.0)", "isort", "mypy (>=0.931)", "types-requests", "types-typed-ast"] +test = ["cython", "html5lib", "pytest", "pytest-cov", "typed-ast"] [[package]] name = "sphinx-autobuild" @@ -893,7 +890,7 @@ docutils = "<0.17" sphinx = "*" [package.extras] -dev = ["transifex-client", "sphinxcontrib-httpdomain", "bump2version"] +dev = ["bump2version", "sphinxcontrib-httpdomain", "transifex-client"] [[package]] name = "sphinxcontrib-applehelp" @@ -904,7 +901,7 @@ optional = true python-versions = ">=3.5" [package.extras] -lint = ["flake8", "mypy", "docutils-stubs"] +lint = ["docutils-stubs", "flake8", "mypy"] test = ["pytest"] [[package]] @@ -916,7 +913,7 @@ optional = true python-versions = ">=3.5" [package.extras] -lint = ["flake8", "mypy", "docutils-stubs"] +lint = ["docutils-stubs", "flake8", "mypy"] test = ["pytest"] [[package]] @@ -928,8 +925,8 @@ optional = true python-versions = ">=3.6" [package.extras] -lint = ["flake8", "mypy", "docutils-stubs"] -test = ["pytest", "html5lib"] +lint = ["docutils-stubs", "flake8", "mypy"] +test = ["html5lib", "pytest"] [[package]] name = "sphinxcontrib-jsmath" @@ -940,7 +937,7 @@ optional = true python-versions = ">=3.5" [package.extras] -test = ["pytest", "flake8", "mypy"] +test = ["flake8", "mypy", "pytest"] [[package]] name = "sphinxcontrib-qthelp" @@ -951,7 +948,7 @@ optional = true python-versions = ">=3.5" [package.extras] -lint = ["flake8", "mypy", "docutils-stubs"] +lint = 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