From da61ae5abecec5258ad8f7129aef835d747cd9c8 Mon Sep 17 00:00:00 2001 From: Philip Cook Date: Mon, 22 May 2023 09:48:13 -0400 Subject: [PATCH] DOC: Clarify random seeding option --- Scripts/antsBrainExtraction.sh | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/Scripts/antsBrainExtraction.sh b/Scripts/antsBrainExtraction.sh index 3f44c6edf..588b1a564 100755 --- a/Scripts/antsBrainExtraction.sh +++ b/Scripts/antsBrainExtraction.sh @@ -131,9 +131,8 @@ Optional arguments: Without this option, this script calls antsAI to search for a good initial moving transform. -s: Image file suffix Any of the standard ITK IO formats e.g. nrrd, nii.gz, mhd (default = $OUTPUT_SUFFIX) - -u: Use random seeding Use random number generated from system clock (1) or a fixed seed (0). Using - "-u 0" overrides a system setting of ANTS_RANDOM_SEED. To produce identical results, - multi-threading must also be disabled by setting the environment variable + -u: Use random seeding Use random number generated from system clock (1) or a fixed seed (0). To produce identical + results, multi-threading must also be disabled by setting the environment variable ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS=1. Default = $USE_RANDOM_SEEDING. -k: Keep temporary files Keep brain extraction/segmentation warps, etc (default = $KEEP_TMP_IMAGES). -q: Use single floating point precision Use antsRegistration with single (1) or double (0) floating point precision (default = $USE_FLOAT_PRECISION).